Pairwise Alignments

Query, 367 a.a., branched chain amino acid ABC transporter substrate-binding protein LivJ from Escherichia coli ECOR27

Subject, 372 a.a., Extracellular ligand-binding receptor (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  217 bits (553), Expect = 4e-61
 Identities = 121/355 (34%), Positives = 195/355 (54%), Gaps = 5/355 (1%)

Query: 6   KALLAGCIALAFSNMALAED-IKVAVVGAMSGPVAQYGDQEFTGAEQAVADINAKGGIKG 64
           K L+AG      +  A A D IK  V GA SG +A YG      A+     INAKGG+ G
Sbjct: 7   KGLVAGLAVAVMACPAFAADTIKFGVAGAHSGDLASYGLPTVNAAKLVAKMINAKGGVLG 66

Query: 65  NKLQIVKYDDACDPKQAVAVANKVVNDGIKYVIGHLCSSSTQPASDIYEDEGILMITPAA 124
            +++++  DD C P+ A   A K+V+DG   V+GH+CS +T+ A  IY++  I++++P+A
Sbjct: 67  KQVEVIPQDDQCKPELATNAATKLVSDGANVVLGHICSGATKAALPIYKEANIVLMSPSA 126

Query: 125 TAPELTARG-YQLILRTTGLDSDQGPTAAKYILEKVKPQRIAIVHDKQQYGEGLAR-AVQ 182
           T P LT  G Y    RT   D  Q      + ++K+  ++IA++HDK  YG+G A  A Q
Sbjct: 127 TNPALTQSGDYPNFFRTIASDDQQAKLGVDFTIDKLGKKKIAVLHDKGDYGKGYAEYAKQ 186

Query: 183 DGLKKGNANVVFFDGITAGEKDFSTLVARLKKENIDFVYYGGYHPEMGQILRQARAAGLK 242
              + G   VV F+G+T G  D+S +V +++    + V +GGYHPE  +I++Q R   + 
Sbjct: 187 FVEQSGKGTVVLFEGVTPGAVDYSAVVQKIRNSGAEAVMFGGYHPEASKIVQQLRKKRMD 246

Query: 243 TQFMGPEGVANVSLSNIAGESAEGLLVTKPKNYDQVPANKPIVDAIKAKKQDPSGAFVWT 302
             F+  +GV + +   +AG+ AEG+  +  K+   +P  K  ++A   +     GAF   
Sbjct: 247 LPFVSDDGVKDDTFIKVAGKDAEGVYASSSKDVSALPLYKEAIEAHVKEFGAEPGAFYKE 306

Query: 303 TYAALQSLQAGLNQ--SDDPAEIAKYLKANSVDTVMGPLTWDEKGDLKGFEFGVF 355
            YAA  +L   + +  S D A+I   L+   V+T +G + +D++GD +G  F ++
Sbjct: 307 AYAASLALLNAIEKAGSTDSAKIMNALRTEFVETSVGKIKFDKRGDAEGVGFSMY 361