Pairwise Alignments

Query, 357 a.a., DNA replication/repair protein RecF from Escherichia coli ECOR27

Subject, 361 a.a., SMC domain protein (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 79.3 bits (194), Expect = 1e-19
 Identities = 99/351 (28%), Positives = 149/351 (42%), Gaps = 28/351 (7%)

Query: 1   MSLTRLLIRDFRNIETADLALSPGFNFLVGANGSGKTSVLEAIYTLGHGRAFRSLQIGRV 60
           +++T L +  FR+     L+L      L G NG GKT+VLEA+  L  GR  R  +   V
Sbjct: 4   VAVTSLSLSHFRSHTHLTLSLDERPVVLHGPNGIGKTNVLEALSFLSPGRGLRRAKTEAV 63

Query: 61  IRHEQ------EAFVLHGRLQGEERETAIGLTKDKQGDSK-VRIDGTDGHKVAELAHLMP 113
            + E        A V  G   G ERE    +T+   G S+ V++DG    ++A LA L+P
Sbjct: 64  GQSEAGLGWRVSALVKSG---GREREV---MTRSDAGASRTVQLDGKPVPQMA-LAELVP 116

Query: 114 MQLITPEGFTLLNGGPKYRRAFLDWGCFHNEPGFFTAWSNLKRLLKQRNAALRQVTR--- 170
           M  + P    L     + RR FLD    +            +R ++ RN  L+   R   
Sbjct: 117 MVWLVPAMDRLWIEAAEGRRKFLDRMTLNFVTTHGRDVLAYERAMRDRNRLLKDGVRDPH 176

Query: 171 -YEQLRPWDKELIPLAEQISTWRAEYSAGIAADMADTCKQFLPEFSLTFSFQRG---WEK 226
            Y  L   + ++     +I+  R    + I A  AD    F P   L      G      
Sbjct: 177 WYHAL---EAQMAEAGARITQNRQRCLSEIEAAQADATTAF-PFAGLQIEAHDGRAPLRT 232

Query: 227 ETEYAEVLERNFERDRQLTYTAHGPHKADLRIR--ADGAPVEDTLSRGQLKLLMCALRLA 284
           + E    L  N   D+    T  GPH+ DL     + G P  D  S G+ K L+ +L L+
Sbjct: 233 KGEIENTLRCNRYMDQTAGRTLDGPHRDDLAAVYVSKGTPARDC-STGEQKALLISLILS 291

Query: 285 QGEFLTRESGRRCLYLIDDFASELDDERRGLLASRLKATQSQVFVSAISAE 335
               +    G+  L L+D+ A+ LD ER+  L   + A  +Q +++   AE
Sbjct: 292 MSRAVKSLVGQAPLVLLDEVAAHLDQERQRALYDEICALGAQAWMTGTGAE 342