Pairwise Alignments

Query, 538 a.a., carbohydrate-specific porin BglH from Escherichia coli ECOR27

Subject, 416 a.a., maltoporin from Vibrio cholerae E7946 ATCC 55056

 Score =  117 bits (293), Expect = 8e-31
 Identities = 116/430 (26%), Positives = 189/430 (43%), Gaps = 60/430 (13%)

Query: 127 YNGYYRSGWGTASHGSP-KSWAIGSLGRFGNEYSGWFDLQLKQRVYN-ENGKRVDAVVMM 184
           +NGY+R+G G + +G+  ++      GR GNE   +++    + +   E   +V++++  
Sbjct: 29  FNGYFRAGTGISGNGNADQAVNKAGTGRLGNENDNYYEFGFAEELKTGEQTWKVESMIAQ 88

Query: 185 DGNVGQQYSTGWFGDNAGGENFMQFSDMYVTTKGFLPFAPEADFWVGKHGAPKIEIQMLD 244
            GN G   + GW     G  N  QF+   V  KG L    EA  W GK    + +I + D
Sbjct: 89  -GNSG---ANGW---EDGDFNVAQFN---VQAKGLLASDQEAVMWAGKRYYQRKDIHITD 138

Query: 245 WKTQRTDAAAGVGLENWKVGPGKIDIALVREDVDDYDRSLQNKQQINTNT----IDLRYK 300
           +    T    G G+EN  VG  K+ +ALV +D D            NTN+     D R  
Sbjct: 139 FYFLNTSGTGG-GIENLSVGNQKLSVALV-QDGD------------NTNSSGYIFDARLA 184

Query: 301 DIPLWDKATLMVSGRYVTANESASEKDNQDNNGYYDWKDTWMFGTSLTQKFDKGGFNEFS 360
           +I LW+ A+L ++  Y      A+EKD+++     +  D  +  +++  +    GFN+  
Sbjct: 185 NIGLWENASLELAMAY----NFATEKDSKN-----EVADDGVLVSAILHQGLSNGFNQTV 235

Query: 361 FLVANNSIASNFGRYAGASPFTTFNGRYYGDHTGGTAVRLTSQGEAYIGDHFIVANAIVY 420
           F        +    + GA  +       + D +G    RL + G   +G+++ + + + Y
Sbjct: 236 FQYGTAGYGAQAANFWGAGSYYARGTEAFNDASG---FRLLNWGVINLGENWEMGHQLAY 292

Query: 421 SFGNDI----------YSYETGAHSDFESIRAVVRPAYILDQYNQTGVELGYFTQQNKDA 470
             G+DI           +  TG   D +    VVRP Y  +   +T  E GY     K +
Sbjct: 293 LAGSDIGGQFGGDGANKNTYTGKSFDIDQYSVVVRPMYKWNDTMRTVFEAGY-NAGEKIS 351

Query: 471 NSNKFNE--SGYKTTLFHTFKVNTSMLTSRPEIRFYATYIKALENELDGFTFEDNKDDQF 528
           N     E     K T+   + +  S   +RPE+R Y TY+   EN+     F D+ D +F
Sbjct: 352 NGGLATEDFGNAKFTVAQAWAMGDS-FWARPELRVYGTYLLDTENDK---AFGDD-DTEF 406

Query: 529 AVGAQAEIWW 538
            VG Q E WW
Sbjct: 407 VVGIQVEAWW 416