Pairwise Alignments

Query, 162 a.a., transcription/translation regulatory transformer protein RfaH from Escherichia coli ECOR27

Subject, 169 a.a., transcriptional activator RfaH from Pseudomonas stutzeri RCH2

 Score = 93.6 bits (231), Expect = 1e-24
 Identities = 61/150 (40%), Positives = 78/150 (52%), Gaps = 3/150 (2%)

Query: 4   WYLLYCKRGQLQRAQEHLERQAVNCLAPMITLEKIVRGKRTA-VSEPLFPNYLFVEFDPE 62
           WYL+  K  Q  RA+EHL RQ   C  P +      RG   A   E LFP YLF+  D  
Sbjct: 9   WYLIQTKPRQEARAEEHLLRQHFECYRP-VKASSPSRGSPIARTGEALFPGYLFIRLDCI 67

Query: 63  VIHTTTINATRGVSHFVRFGASPAIVPSAVIHQLSV-YKPKDIVDPATPYPGDKVIITEG 121
             +   I +TRGVS  V FG  P  V   +I QL       +    AT  PGD+V ++ G
Sbjct: 68  HDNWYPIRSTRGVSRVVSFGGQPTPVRDELIAQLRQRLAQSESGRTATFNPGDRVHVSGG 127

Query: 122 AFEGFQAIFTEPDGEARSMLLLNLINKEIK 151
           +F   +AIF   DGE RS++LLNL+ +E K
Sbjct: 128 SFSEIEAIFVSSDGEERSVILLNLLQREQK 157