Pairwise Alignments

Query, 162 a.a., transcription/translation regulatory transformer protein RfaH from Escherichia coli ECOR27

Subject, 192 a.a., putative transcriptional regulator (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 43.5 bits (101), Expect = 2e-09
 Identities = 34/151 (22%), Positives = 66/151 (43%), Gaps = 12/151 (7%)

Query: 4   WYLLYCKRGQLQRAQEHLERQAVNCLAPMITLEKIVRGKRTAVSEPLFPNYLFVEFDP-- 61
           WY+   +    ++  EHL++  +    P+         +R  V+  L P  +FV  DP  
Sbjct: 27  WYVALVRMHHEKKVSEHLDKMGIENFVPVQQELHQWSDRRKLVTSVLLPMMVFVHADPKE 86

Query: 62  --EVIHTTTINATRGVSHFVRFGASPAIVPSAVIHQLSV---YKPKDIVDPATPYP-GDK 115
             EV+  +T++        +R  +SPA++P   + +      Y  + I   ++P   G+K
Sbjct: 87  RMEVLSFSTVSRYM----VMRGESSPAVIPDEQMARFRFMLDYSEESISMNSSPLARGEK 142

Query: 116 VIITEGAFEGFQAIFTEPDGEARSMLLLNLI 146
           V + +G   G        DG ++  + LN++
Sbjct: 143 VRVIKGPLTGLVGELVNVDGRSKIAVRLNML 173