Pairwise Alignments

Query, 928 a.a., DNA polymerase I from Escherichia coli ECOR27

Subject, 922 a.a., DNA polymerase I (RefSeq) from Shewanella sp. ANA-3

 Score = 1184 bits (3064), Expect = 0.0
 Identities = 611/930 (65%), Positives = 725/930 (77%), Gaps = 10/930 (1%)

Query: 1   MVQIPQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAV 60
           M  I  NPL+LVDGSSYLYRAY+A P LTNS GE TGA+YGV+NMLRSL+ +Y+P+H AV
Sbjct: 1   MPTIANNPLVLVDGSSYLYRAYYAPPHLTNSKGEATGAVYGVVNMLRSLLSRYQPSHIAV 60

Query: 61  VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGT 120
           VFDAKGKTFR++L+E YK+HRPPMPDDLR+QIEPLH +++A+GLPL+++ GVEADDVIGT
Sbjct: 61  VFDAKGKTFRNDLYEEYKAHRPPMPDDLRSQIEPLHRIIRALGLPLISIPGVEADDVIGT 120

Query: 121 LAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFL 180
           +AR+A +  R VLISTGDKDMAQLV  NITLINTMT+TI+GPEEV  KYGV P+ IIDFL
Sbjct: 121 IARQASRENRAVLISTGDKDMAQLVDENITLINTMTDTIMGPEEVAAKYGVGPDRIIDFL 180

Query: 181 ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNK 240
           ALMGD +DNIPG+PGVGEKTA A+L G G +  L AEPEK+  L FRGAKTMAAK+  N 
Sbjct: 181 ALMGDKADNIPGLPGVGEKTALAMLTGAGSVANLLAEPEKVTELGFRGAKTMAAKIIDNA 240

Query: 241 EVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAK 300
           ++  LSY+LATIKTDVELE    +L  +    +EL+  + + EFKRW A+V   K     
Sbjct: 241 DMLKLSYELATIKTDVELEQDWHELTAKPADRDELIKCYGEMEFKRWLAEVLDNK----A 296

Query: 301 GAKPAAKPQETSVADE-APEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETD 359
            A  AAK + T   +E AP VT        Y TIL E  L  WIAKL++AP+ A DTET 
Sbjct: 297 PATVAAKAETTETQEESAPSVTIET----QYDTILTEAQLDEWIAKLKQAPLMAVDTETT 352

Query: 360 SLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQ 419
           SLD + A LVGLSFA+E G AAY+P+AHDY+ AP Q+ ++ ALE L+PLLED K  KVGQ
Sbjct: 353 SLDYMVAELVGLSFAVEAGKAAYLPLAHDYVGAPQQLDKQTALEKLRPLLEDAKIKKVGQ 412

Query: 420 NLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGK 479
           NLKYD  +LAN GI+L+G+ FDTMLESY+ NS+A RHDMD LA ++L HK I FE+IAGK
Sbjct: 413 NLKYDISVLANAGIKLQGVVFDTMLESYVFNSIASRHDMDGLALKYLGHKNIAFEDIAGK 472

Query: 480 GKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSR 539
           G  QLTFNQI LE A  YAAEDAD+TL+LH  +WP L+K     +VF +IE+PL+ +LS 
Sbjct: 473 GAKQLTFNQIPLETAAPYAAEDADITLRLHQHLWPRLEKETELASVFTDIELPLIQILSD 532

Query: 540 IERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPL 599
           IER GV ID  +L   S+EL  ++ ELE KA++IAGE+FNLSS KQLQ + FEK G   +
Sbjct: 533 IERQGVFIDSMLLGQQSDELARKIDELETKAYDIAGEKFNLSSPKQLQVLFFEKLGYPVI 592

Query: 600 KKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSY 659
           KKTP GAPST+EEVL ELALD+PLPKVILE+R L KLKSTYTDKLPLM+N KTGRVHTSY
Sbjct: 593 KKTPKGAPSTAEEVLVELALDFPLPKVILEHRSLTKLKSTYTDKLPLMVNAKTGRVHTSY 652

Query: 660 HQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSR 719
           HQA  ATGRLSS++PNLQNIP+R EEGRRIRQAFIAP+   I++ADYSQIELRIMAHLS+
Sbjct: 653 HQANAATGRLSSSEPNLQNIPIRTEEGRRIRQAFIAPQGRKILAADYSQIELRIMAHLSQ 712

Query: 720 DKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNI 779
           D GLL AFAEGKDIHRATAAEVFG   ++VTSEQRR AKA+NFGLIYGMSAFGLARQL+I
Sbjct: 713 DAGLLKAFAEGKDIHRATAAEVFGTDFDSVTSEQRRRAKAVNFGLIYGMSAFGLARQLDI 772

Query: 780 PRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAA 839
           PR EAQ Y+D YF RYPGVL YME TRA A E GYV TL GRRLYLP+I+  N  RR AA
Sbjct: 773 PRNEAQTYIDTYFARYPGVLRYMEETRASAAELGYVSTLFGRRLYLPEIRDRNAMRRQAA 832

Query: 840 ERAAINAPMQGTAADIIKRAMIAVDAWLQAE-QPRVRMIMQVHDELVFEVHKDDVDAVAK 898
           ERAAINAPMQGTAADIIK+AMI++  W++ + Q  + MIMQVHDELVFEV  D  + +  
Sbjct: 833 ERAAINAPMQGTAADIIKKAMISIADWIKTDTQGEIAMIMQVHDELVFEVDADKAETLKL 892

Query: 899 QIHQLMENCTRLDVPLLVEVGSGENWDQAH 928
           ++ +LM     LDV LL E G G+NWDQAH
Sbjct: 893 KVCELMAKAANLDVELLAEAGIGDNWDQAH 922