Pairwise Alignments

Query, 430 a.a., Uncharacterized protein YjcF from Escherichia coli ECOR27

Subject, 217 a.a., pentapeptide repeat family protein from Marinobacter adhaerens HP15

 Score = 43.9 bits (102), Expect = 5e-09
 Identities = 61/255 (23%), Positives = 99/255 (38%), Gaps = 52/255 (20%)

Query: 119 VSIKVVYFINNVAVHNNTIEIPQT--VNGGYDFSHLSLKGIVIKDEDLSNSNFAGCRLQN 176
           +S  ++ FI      +   E+ Q   +NG       S  G  ++  DLSN +     L++
Sbjct: 5   ISASLLLFIAPALAGDYMAELDQVPVINGCKLEREASCAGADLQGADLSNMD-----LRS 59

Query: 177 AIFQDCNMYKTNFYYAIMEKILFDNCILDDSNFAQIKMADGTLNACSAMHVQFYNAAMNR 236
           A F+  N+   N  +  +         LD +N          LN  +   +Q Y A+M  
Sbjct: 60  ANFRGANLSGANLSHTSLR-----GANLDGAN----------LNDVTGYRLQVYRASMRG 104

Query: 237 ANIKNTFLDYSNFYMAYMAEVNLYKVIAPYVNLFKADLSFSKLDLINFEHADLSRVNLNK 296
           A+++N                 L  +   Y+    AD S + L   NF   D SR   + 
Sbjct: 105 ASLRNA---------------RLQGMQGEYLFAQGADFSGADLSGANF---DFSR--FSG 144

Query: 297 AILQNINLIDSKLFCTWLTNTFLEMVICTGSNMANVNFNNANLSNCHFNCSILTKACMFN 356
           A L N+N+  S    +WL    LE     G+NM+  N   A L   +     L  A +  
Sbjct: 145 ATLVNVNMPFSSFEISWLPKANLE-----GANMSGANLQEAKLGLAN-----LADADLTG 194

Query: 357 TRLYRVNFDEASVQG 371
           TR++   F+   ++G
Sbjct: 195 TRIHYATFEGTHMEG 209



 Score = 27.7 bits (60), Expect = 3e-04
 Identities = 14/67 (20%), Positives = 33/67 (49%)

Query: 314 LTNTFLEMVICTGSNMANVNFNNANLSNCHFNCSILTKACMFNTRLYRVNFDEASVQGMG 373
           L+N  L      G+N++  N ++ +L   + + + L     +  ++YR +   AS++   
Sbjct: 52  LSNMDLRSANFRGANLSGANLSHTSLRGANLDGANLNDVTGYRLQVYRASMRGASLRNAR 111

Query: 374 ISILRGE 380
           +  ++GE
Sbjct: 112 LQGMQGE 118



 Score = 25.0 bits (53), Expect = 0.002
 Identities = 30/123 (24%), Positives = 48/123 (39%), Gaps = 15/123 (12%)

Query: 253 YMAEVNLYKVIAPYVNLFKADLSFSKLDLINFEHADLSRVNLNKAILQNINLIDSKLFCT 312
           YMAE++      P +N  K +   S     + + ADLS ++L  A  +  NL  + L  T
Sbjct: 21  YMAELDQ----VPVINGCKLEREASCAGA-DLQGADLSNMDLRSANFRGANLSGANLSHT 75

Query: 313 WLTNTFLEMVICTGSNMANVNFNNANLSNCHFNCSILTKACMFNTRLYRVNFDEASVQGM 372
            L           G+N+   N N+          + +  A + N RL  +  +    QG 
Sbjct: 76  SLR----------GANLDGANLNDVTGYRLQVYRASMRGASLRNARLQGMQGEYLFAQGA 125

Query: 373 GIS 375
             S
Sbjct: 126 DFS 128