Pairwise Alignments

Query, 712 a.a., anaerobic ribonucleoside-triphosphate reductase from Escherichia coli ECOR27

Subject, 705 a.a., anaerobic ribonucleoside-triphosphate reductase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 1159 bits (2998), Expect = 0.0
 Identities = 555/705 (78%), Positives = 624/705 (88%), Gaps = 2/705 (0%)

Query: 3   PHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDINEIQ 62
           P V+KRDGC+ PF   RI++A++ AA +  ++D DY ATVAA VS ++    +V+I+ +Q
Sbjct: 2   PVVIKRDGCRTPFDETRIRDAVIAAANSVGIEDTDYAATVAACVSARVANMAEVEIHHLQ 61

Query: 63  TAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENANKDS 122
             VEN LM GPYK LAR YIEYRHDRDI R+   +LN EIRGLVEQ+NA+LLNENANKDS
Sbjct: 62  DVVENLLMEGPYKSLARVYIEYRHDRDICRDATSKLNLEIRGLVEQSNAALLNENANKDS 121

Query: 123 KVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDLKG 182
           KVIPTQRDLLAGIVAKHYA+ H+LP+DVV AHE G+IHYHDLDYSPFFPMFNCMLIDL G
Sbjct: 122 KVIPTQRDLLAGIVAKHYAKSHILPKDVVAAHEMGEIHYHDLDYSPFFPMFNCMLIDLAG 181

Query: 183 MLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTASYNK 242
           MLT GFKMGNAEIE PKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFV  SY+K
Sbjct: 182 MLTHGFKMGNAEIETPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVAKSYDK 241

Query: 243 HRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVTFGFGLGTSWE 302
           H + A  W I DA+ YA ++T KEC+DAFQSLEYEVNTLHTANGQTPFVTFGFGLGTSWE
Sbjct: 242 HYQVALNWQIKDAKAYATAQTEKECHDAFQSLEYEVNTLHTANGQTPFVTFGFGLGTSWE 301

Query: 303 SRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQLALECASKRMY 362
           SRLIQ+S+L+ R+AGLGKNRKTAVFPKLVFAIRDG+NHK GD NYD+KQLAL+CA+ RMY
Sbjct: 302 SRLIQQSMLKVRMAGLGKNRKTAVFPKLVFAIRDGINHKVGDCNYDVKQLALKCATMRMY 361

Query: 363 PDILNYDQVVKVTGSFKTPMGCRSFLGVWENENGEQIHDGRNNLGVISLNLPRIALEAKG 422
           PDILNY+QV KVTGSFKTPMGCRSFLG ++ ENGE +H+GRNNLGV+SLNLPR+ALEAKG
Sbjct: 362 PDILNYEQVEKVTGSFKTPMGCRSFLGSYK-ENGELVHEGRNNLGVVSLNLPRVALEAKG 420

Query: 423 DEATFWKLLDERLVLARKALMTRIARLEGVKARVAPILYMEGACGVRLNADDDVSEIFKN 482
           DEA F+++LDERL+LAR+AL TRI RL GVKARVAPILYMEGACGVRL ADDD+++IFKN
Sbjct: 421 DEAEFYRILDERLLLARRALDTRIERLNGVKARVAPILYMEGACGVRLRADDDIAQIFKN 480

Query: 483 GRASISLGYIGIHETINALFGGE-HVYDNEQLRAKGIAIVERLRQAVDQWKEETGYGFSL 541
           GRASISLGYIG+HETINAL+G E HV+DN QLR K +AIV  L+ A D WK ETGYGFSL
Sbjct: 481 GRASISLGYIGLHETINALYGTETHVFDNAQLREKAVAIVAYLKAATDAWKAETGYGFSL 540

Query: 542 YSTPSENLCDRFCRLDTAEFGVVPGVTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPLA 601
           YSTPSE+LC RFC+LD  +FGVV GVTDKGYYTNSFHLDVEK+VNPYDKIDFE PYP +A
Sbjct: 541 YSTPSESLCSRFCKLDARQFGVVTGVTDKGYYTNSFHLDVEKRVNPYDKIDFEQPYPAIA 600

Query: 602 NGGFICYGEYPNIQHNLKALEDVWDYSYQHVPYYGTNTPIDECYECGFTGEFECTSKGFT 661
           NGGFICYGEYPN+QHN++ALE+VWDYSY  VPYYGTNTPIDECY+CGFTGEF CTSKGFT
Sbjct: 601 NGGFICYGEYPNMQHNIEALENVWDYSYSRVPYYGTNTPIDECYDCGFTGEFSCTSKGFT 660

Query: 662 CPKCGNHDASRVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKHL 706
           CPKCGNH+ SRVSVTRRVCGYLGSPDARPFN GKQEEVKRR+KHL
Sbjct: 661 CPKCGNHEPSRVSVTRRVCGYLGSPDARPFNHGKQEEVKRRIKHL 705