Pairwise Alignments

Query, 504 a.a., L-carnitine/gamma-butyrobetaine antiporter from Escherichia coli ECOR27

Subject, 514 a.a., L-carnitine/gamma-butyrobetaine antiporter (RefSeq) from Shewanella loihica PV-4

 Score =  741 bits (1912), Expect = 0.0
 Identities = 342/502 (68%), Positives = 413/502 (82%), Gaps = 2/502 (0%)

Query: 2   KNEKRKTGIEPKVFFPPLIIVGILCWLTVRDLDAANVVINAVFSYVTNVWGWAFEWYMVV 61
           + +K+K  IEPK+FFP LI V +L +LTVRDLDAANVVI  VF Y+T+ WGWAFEWYM+ 
Sbjct: 12  EGKKKKVTIEPKIFFPSLIAVILLSYLTVRDLDAANVVIKEVFHYLTHSWGWAFEWYMIA 71

Query: 62  MLFGWFWLVFGPYAKKRLGNEPPEFSTASWIFMMFASCTSAAVLFWGSIEIYYYISTPPF 121
           +  GW WLV+GPYA  RLG E PEFST SWIF+MFASCTSAAVL+WGS+E YYY++ PPF
Sbjct: 72  LAIGWGWLVWGPYANNRLGQEKPEFSTGSWIFLMFASCTSAAVLYWGSLEAYYYLTYPPF 131

Query: 122 GLEPNSTGAKELGLAYSLFHWGPLPWATYSFLSVAFAYFFFVRKMEVIRPSSTLVPLVGE 181
            ++  S  AKELG+AYSLFHWGPLPW  Y F +VA  YF FV+KM+V+RPS TL P++G 
Sbjct: 132 EIQSMSVQAKELGVAYSLFHWGPLPWMGYGFFTVALGYFLFVKKMDVVRPSGTLAPVLG- 190

Query: 182 KHAKGLFGTIVDNFYLVALIFAMGTSLGLATPLVTECMQWLFGIPHTLQLDAIIITCWII 241
           KH KG+ GT +DN Y+VALI AMGTSLGLATPLVTEC+QWLFGI  T+++D  +I+ WII
Sbjct: 191 KHHKGILGTFIDNIYVVALILAMGTSLGLATPLVTECIQWLFGIERTIEVDTFVISVWII 250

Query: 242 LNAICVACGLQKGVRIASDVRSYLSFLMLGWVFIVSGASFIMNYFTDSVGMLLMYLPRML 301
            NA+CVA GL KG++IASD+RSYLS +ML WVF++   SF +NYFT+SVG++L YLPRML
Sbjct: 251 FNAVCVAFGLTKGIKIASDLRSYLSIIMLFWVFLIGATSFTVNYFTESVGVMLAYLPRML 310

Query: 302 FYTDPIAKGGFPQGWTVFYWAWWVIYAIQMSIFLARISRGRTVRELCFGMVLGLTASTWI 361
           FYT  I+   +PQ WTVFYWAWWV+Y IQM IFLA+ISRGRTVRELC  MVLGLTASTW 
Sbjct: 311 FYTSSISADSWPQDWTVFYWAWWVVYGIQMCIFLAKISRGRTVRELCLTMVLGLTASTWF 370

Query: 362 LWTVLGSNTLLLIDKNIINIPNLIEQYGVARAIIETWAALPLSTATMWGFFILCFIATVT 421
           LWT+LGSNT+ L+ ++IIN+  LI+ +G  RAIIETWAALP+ST TMWGFFILCF+ATVT
Sbjct: 371 LWTILGSNTVNLMHESIINMGQLIQDHGAPRAIIETWAALPMSTITMWGFFILCFLATVT 430

Query: 422 LVNACSYTLAMSTCREVRDGEEPPLLVRIGWSILVGIIGIVLLALGGLKPIQTAIIAGGC 481
           L+NACSYTLAMSTC+      EPP+ +R+GWS+LVG+IGIVLL+LGGLKP+QTAIIAGG 
Sbjct: 431 LINACSYTLAMSTCKGADADNEPPVWIRVGWSVLVGVIGIVLLSLGGLKPLQTAIIAGGA 490

Query: 482 PLFFVNIMVTLSFIKDA-KQNW 502
           PL  VNI+V +SF+KDA K NW
Sbjct: 491 PLVIVNILVIISFLKDARKNNW 512