Pairwise Alignments

Query, 660 a.a., Fe(3+)-hydroxamate ABC transporter permease FhuB from Escherichia coli ECOR27

Subject, 347 a.a., iron-compound ABC transporter, permease protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  149 bits (376), Expect = 2e-40
 Identities = 100/275 (36%), Positives = 158/275 (57%), Gaps = 7/275 (2%)

Query: 386 LMPWRWPRIMAALFAGVMLAVAGCIIQRLTGNPMASPEVLGISSGAAFG--VVLMLFLVP 443
           L+  R PRI+ A   G  LA++G  +Q +T NP+A P + GIS+GA+ G  VVL L +  
Sbjct: 69  LLELRLPRILLAFVCGAGLALSGWALQLVTRNPLADPYLFGISAGASLGAIVVLSLGITH 128

Query: 444 GNAFGWLLPAGS-LGAAVTLLIIMIAAGRGGFSP-HRMLLAGMALSTAFTMLLMMLQASG 501
           G      LP G+ +GA+ ++L+++  +G G  S   RMLL+G+A S  F  L  +L    
Sbjct: 129 GVLLAIGLPLGAFIGASASVLVVLTLSGFGLQSQVERMLLSGVATSFLFGALGSLLLYFS 188

Query: 502 DPRM-AQVLTWISGSTYNATDAQVWRTGIVMVILLAITPLCRRWLTILPLGGDTARAVGM 560
            P++ A V+ W  GS   A    +W   +V    +A   L RR L  L  G +TA A+G+
Sbjct: 189 SPQVTASVIFWSLGSFARAAWDLLWLPWLVFGGFVAFLLLVRRQLFALSAGDETAHALGV 248

Query: 561 ALTPTRIALLLLAACLTATATMTIGPLSFVGLMAPHIARMMGFRRTMPHIVISALVGGLL 620
           ++   RI  LL+ + +TA    + G + FVGLM PHIAR++ F  +   ++I A++GGL 
Sbjct: 249 SVAKLRIISLLMCSLMTAVLVASCGGIGFVGLMIPHIARLL-FPGSQ-SLLIVAMLGGLF 306

Query: 621 LVFADWCGRMVLFPFQIPAGLLSTFIGAPYFIYLL 655
           +V+ D   R +L P ++P G+++  +G+ +F+ LL
Sbjct: 307 MVWVDVMTRSLLPPQELPVGVITAVVGSVFFLMLL 341



 Score =  122 bits (305), Expect = 3e-32
 Identities = 100/333 (30%), Positives = 167/333 (50%), Gaps = 14/333 (4%)

Query: 5   IALFPALLLALLVIVATALTWMNFSQALPRSQWAQAAWSP-DINVIEQMIFHYSLLPRLA 63
           +AL  A LL+ ++        ++F +A+     +     P D+  ++  I     LPR+ 
Sbjct: 19  LALILACLLSPVLASIFGAVDISFREAMSVYLHSLIGERPTDVAYLDSRILLELRLPRIL 78

Query: 64  ISLLVGAGLGLVGVLFQQVLRNPLAEPTTLGVATGAQLG-ITVTTLWAIPG---AMASQF 119
           ++ + GAGL L G   Q V RNPLA+P   G++ GA LG I V +L    G   A+    
Sbjct: 79  LAFVCGAGLALSGWALQLVTRNPLADPYLFGISAGASLGAIVVLSLGITHGVLLAIGLPL 138

Query: 120 AALAGACVVGLIVFGVA-WGKRLSPVTLILAGLVVSLYCGAINQLLVIFHHDQLQ-SMFL 177
            A  GA    L+V  ++ +G +     ++L+G+  S   GA+  LL+ F   Q+  S+  
Sbjct: 139 GAFIGASASVLVVLTLSGFGLQSQVERMLLSGVATSFLFGALGSLLLYFSSPQVTASVIF 198

Query: 178 WSTGTLTQTDWGGVERLWPQLLGGVMLTLLLLRPLTLMGLDDGVARNLGLALSLARLAAL 237
           WS G+  +  W  +   W    G V   LL+ R L  +   D  A  LG++++  R+ +L
Sbjct: 199 WSLGSFARAAWDLLWLPWLVFGGFVAFLLLVRRQLFALSAGDETAHALGVSVAKLRIISL 258

Query: 238 SLAIVISALLVNAVGIIGFIGLFAPLLAKML--GARRLLPRLMLASLIGALILWLSDQII 295
            +  +++A+LV + G IGF+GL  P +A++L  G++ L   L++A L G  ++W+     
Sbjct: 259 LMCSLMTAVLVASCGGIGFVGLMIPHIARLLFPGSQSL---LIVAMLGGLFMVWVDVMTR 315

Query: 296 LWLTRVWMEVSTGSVTALIGAPLLLWLLPRLRS 328
             L     E+  G +TA++G+   L LL   RS
Sbjct: 316 SLLPP--QELPVGVITAVVGSVFFLMLLFGRRS 346