Pairwise Alignments

Query, 660 a.a., Fe(3+)-hydroxamate ABC transporter permease FhuB from Escherichia coli ECOR27

Subject, 347 a.a., transport system permease protein (RefSeq) from Shewanella loihica PV-4

 Score =  160 bits (404), Expect = 1e-43
 Identities = 112/331 (33%), Positives = 179/331 (54%), Gaps = 25/331 (7%)

Query: 345 QHVLAFALAGGVLLLMAVVVALSFGRDAHGWTWASGALLEDL-------------MPWRW 391
           QH+    L  G+L L   V+A+SFG    G       LL  L             +  R 
Sbjct: 16  QHLAFVCL--GLLTLATPVLAVSFGAAQIGVAEVLEVLLAKLSGADPGGVTARILIELRL 73

Query: 392 PRIMAALFAGVMLAVAGCIIQRLTGNPMASPEVLGISSGAAFGVVLMLFLVPGNAFGWL- 450
           PRI+ A  AG  LA+AG ++Q +T NP+A P + GISSGA+ G V+++ L+ G   G L 
Sbjct: 74  PRILLAFIAGFGLALAGAVLQTVTRNPLADPYLFGISSGASLGAVVVITLL-GGVGGALA 132

Query: 451 ---LPAGS-LGAAVTLLIIMIAAGRG-GFSPHRMLLAGMALSTAFTMLL-MMLQASGDPR 504
              LP G+ +GA++ +L+++   GR       RMLL+G+A+S  F  L  +ML  SG   
Sbjct: 133 SVGLPLGAFIGASLAVLMVLALCGRDLNTQIERMLLSGVAISFLFGALASLMLYFSGPQS 192

Query: 505 MAQVLTWISGSTYNATDAQVWRTGIVMVILLAITPLCRRWLTILPLGGDTARAVGMALTP 564
            A VL W  GS   A+   +W   ++++   AI  L +R +  +  G +TA  +G+ +  
Sbjct: 193 AASVLFWSLGSFAKASWQMLWLPWLLVLAASAILLLLKRQILAIQAGDETAHTLGIRVQR 252

Query: 565 TRIALLLLAACLTATATMTIGPLSFVGLMAPHIARMMGFRRTMPHIVISALVGGLLLVFA 624
            R+  LLL + +TA      G + FVGLM PH+ R++   R    ++++ALVGGL +++ 
Sbjct: 253 LRLVSLLLCSLITAVLVANCGGIGFVGLMVPHMVRLLLPGRFA--LLLTALVGGLFMIWV 310

Query: 625 DWCGRMVLFPFQIPAGLLSTFIGAPYFIYLL 655
           D   R +L   ++P G+++  IG+ +F+++L
Sbjct: 311 DVLARCLLSYQELPVGIITAVIGSLFFLFIL 341



 Score =  132 bits (333), Expect = 2e-35
 Identities = 91/278 (32%), Positives = 147/278 (52%), Gaps = 12/278 (4%)

Query: 59  LPRLAISLLVGAGLGLVGVLFQQVLRNPLAEPTTLGVATGAQLG--ITVTTLWAIPGAMA 116
           LPR+ ++ + G GL L G + Q V RNPLA+P   G+++GA LG  + +T L  + GA+A
Sbjct: 73  LPRILLAFIAGFGLALAGAVLQTVTRNPLADPYLFGISSGASLGAVVVITLLGGVGGALA 132

Query: 117 S---QFAALAGACVVGLIVFGVAWGKRLSPVT--LILAGLVVSLYCGAINQLLVIFHHDQ 171
           S      A  GA +  L+V  +  G+ L+     ++L+G+ +S   GA+  L++ F   Q
Sbjct: 133 SVGLPLGAFIGASLAVLMVLALC-GRDLNTQIERMLLSGVAISFLFGALASLMLYFSGPQ 191

Query: 172 -LQSMFLWSTGTLTQTDWGGVERLWPQLLGGVMLTLLLLRPLTLMGLDDGVARNLGLALS 230
              S+  WS G+  +  W  +   W  +L    + LLL R +  +   D  A  LG+ + 
Sbjct: 192 SAASVLFWSLGSFAKASWQMLWLPWLLVLAASAILLLLKRQILAIQAGDETAHTLGIRVQ 251

Query: 231 LARLAALSLAIVISALLVNAVGIIGFIGLFAPLLAKMLGARRLLPRLMLASLIGALILWL 290
             RL +L L  +I+A+LV   G IGF+GL  P + ++L   R    L+L +L+G L +  
Sbjct: 252 RLRLVSLLLCSLITAVLVANCGGIGFVGLMVPHMVRLLLPGRF--ALLLTALVGGLFMIW 309

Query: 291 SDQIILWLTRVWMEVSTGSVTALIGAPLLLWLLPRLRS 328
            D +   L   + E+  G +TA+IG+   L++L   RS
Sbjct: 310 VDVLARCLLS-YQELPVGIITAVIGSLFFLFILGGKRS 346