Pairwise Alignments

Query, 660 a.a., Fe(3+)-hydroxamate ABC transporter permease FhuB from Escherichia coli ECOR27

Subject, 348 a.a., transport system permease protein (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  145 bits (365), Expect = 4e-39
 Identities = 110/342 (32%), Positives = 171/342 (50%), Gaps = 42/342 (12%)

Query: 349 AFALAGGVLLLMAVVVALSFGRDAHGWTWASGALLEDLMP---------------W--RW 391
           +  +AG  +LL+++ VA+S G  A       G + + ++P               W  R 
Sbjct: 18  SLTVAGVAVLLLSISVAVSLGAVAVPLGTVWGIMADRILPGLLTPDWTTGQAAIVWEIRL 77

Query: 392 PRIMAALFAGVMLAVAGCIIQRLTGNPMASPEVLGISSGAAFGVVLMLFLVPGNAFGWL- 450
           PR + A   G  LA+ G  +Q +T NP+A P +LGISSGAAFG +L L L  G   G L 
Sbjct: 78  PRALLAAMVGAGLALVGASLQSVTRNPLADPHLLGISSGAAFGAILAL-LHTGLFLGLLT 136

Query: 451 --LPAGSLGAAVTLLIIMIAAGRGGFSPHRMLLAGMALSTAFTMLLMMLQASGDPRMAQ- 507
             L A +   A TLL++ + +        R++LAG+A+S        +L   GDPR    
Sbjct: 137 VPLLAFAGALAATLLVLGVTSFAQATGADRLVLAGVAVSFIVMSCANILIFIGDPRATHT 196

Query: 508 VLTWISGSTYNATDAQVWRTGIVMVILLAITPLCRRW-------LTILPLGGDTARAVGM 560
           V+ W+ G    A   Q+    +++V        C  W       L  + +G +TA  +G+
Sbjct: 197 VVFWMLGGLGLAQWDQLLFPAVILV-------GCGLWFLANASRLNAMTIGDETASTLGI 249

Query: 561 ALTPTRIALLLLAACLTATATMTIGPLSFVGLMAPHIARMM---GFRRTMPHIVISALVG 617
            +   R+++ ++ A LT       G + FVGLM PHI RM+    + R +P    SALVG
Sbjct: 250 PIARFRLSVFVVGALLTGCMVAFSGIIGFVGLMIPHIVRMLVGGDYARVLP---ASALVG 306

Query: 618 GLLLVFADWCGRMVLFPFQIPAGLLSTFIGAPYFIYLLRKQS 659
            + LV+AD   R V+ P  IP G+++  IG  +F++LLR+++
Sbjct: 307 AIFLVWADIAARTVMAPEDIPIGIVTGLIGGAFFVWLLRRRA 348



 Score =  117 bits (294), Expect = 7e-31
 Identities = 91/289 (31%), Positives = 137/289 (47%), Gaps = 9/289 (3%)

Query: 43  SPDINVIEQMIFHYSLLPRLAISLLVGAGLGLVGVLFQQVLRNPLAEPTTLGVATGAQLG 102
           +PD    +  I     LPR  ++ +VGAGL LVG   Q V RNPLA+P  LG+++GA  G
Sbjct: 61  TPDWTTGQAAIVWEIRLPRALLAAMVGAGLALVGASLQSVTRNPLADPHLLGISSGAAFG 120

Query: 103 ITVTTLWA--IPGAMASQFAALAGACVVGLIVFGV-AWGKRLSPVTLILAGLVVS-LYCG 158
             +  L      G +     A AGA    L+V GV ++ +      L+LAG+ VS +   
Sbjct: 121 AILALLHTGLFLGLLTVPLLAFAGALAATLLVLGVTSFAQATGADRLVLAGVAVSFIVMS 180

Query: 159 AINQLLVIFHHDQLQSMFLWSTGTLTQTDWGGVERLWPQ--LLGGVMLTLLLLRPLTLMG 216
             N L+ I       ++  W  G L    W   + L+P   L+G  +  L     L  M 
Sbjct: 181 CANILIFIGDPRATHTVVFWMLGGLGLAQWD--QLLFPAVILVGCGLWFLANASRLNAMT 238

Query: 217 LDDGVARNLGLALSLARLAALSLAIVISALLVNAVGIIGFIGLFAPLLAKMLGARRLLPR 276
           + D  A  LG+ ++  RL+   +  +++  +V   GIIGF+GL  P + +ML        
Sbjct: 239 IGDETASTLGIPIARFRLSVFVVGALLTGCMVAFSGIIGFVGLMIPHIVRMLVGGDYARV 298

Query: 277 LMLASLIGALILWLSDQIILWLTRVWMEVSTGSVTALIGAPLLLWLLPR 325
           L  ++L+GA+ L  +D I         ++  G VT LIG    +WLL R
Sbjct: 299 LPASALVGAIFLVWAD-IAARTVMAPEDIPIGIVTGLIGGAFFVWLLRR 346