Pairwise Alignments

Query, 660 a.a., Fe(3+)-hydroxamate ABC transporter permease FhuB from Escherichia coli ECOR27

Subject, 381 a.a., Vitamin B12 transporter, permease component (fecCD-like) (from data) from Shewanella sp. ANA-3

 Score =  152 bits (385), Expect = 2e-41
 Identities = 106/299 (35%), Positives = 168/299 (56%), Gaps = 28/299 (9%)

Query: 386 LMPWRWPRIMAALFAGVMLAVAGCIIQRLTGNPMASPEVLGISSGAAFGVVLMLFLVPGN 445
           +M  R PRI+ A  AG  L++AG ++Q +T NP+A P + GISSGA+FG V+ML L  G+
Sbjct: 81  VMELRLPRIILAFVAGAGLSLAGSVLQTVTRNPLADPYLFGISSGASFGAVVMLTLFTGS 140

Query: 446 A-FG---------------------WL-LPAGS-LGAAVTLLIIMIAAGRGGFSP-HRML 480
             FG                     W  LP G+ +GA++++LI++  AG G  S   RML
Sbjct: 141 GLFGNAGTIANSGIFSGSGTFAGLLWFSLPFGAFIGASLSVLIVLALAGLGLKSQVERML 200

Query: 481 LAGMALSTAFTMLLMMLQASGDPR-MAQVLTWISGSTYNATDAQVWRTGIVMVILLAITP 539
           L+G+A S  F+ L  +L     P+  A VL W  GS   A+ + +    +V+++   I  
Sbjct: 201 LSGVATSFMFSALTSLLLYFASPQATASVLFWSLGSFAKASWSLLVLPSLVVLLSFFIIL 260

Query: 540 LCRRWLTILPLGGDTARAVGMALTPTRIALLLLAACLTATATMTIGPLSFVGLMAPHIAR 599
             +R +  L  G +TA  +G+ +   R+ +LLL + +TA    T G + FVGLM PH  R
Sbjct: 261 GWKRQIMALQAGDETAHTLGVNVPKLRLNMLLLCSLITAILVATCGGIGFVGLMIPHTVR 320

Query: 600 MMGFRRTMPHIVISALVGGLLLVFADWCGRMVLFPFQIPAGLLSTFIGAPYFIYLLRKQ 658
           ++ F    P I+++ALVGGL +V+ D   R +L   ++P G+++  IG+ +F+ +LR++
Sbjct: 321 LL-FPGRQP-ILLTALVGGLFMVWIDVLARCLLGNQELPVGIITAAIGSFFFLLILRRR 377



 Score =  103 bits (257), Expect = 1e-26
 Identities = 88/298 (29%), Positives = 140/298 (46%), Gaps = 38/298 (12%)

Query: 59  LPRLAISLLVGAGLGLVGVLFQQVLRNPLAEPTTLGVATGAQLGITV-------TTLWAI 111
           LPR+ ++ + GAGL L G + Q V RNPLA+P   G+++GA  G  V       + L+  
Sbjct: 86  LPRIILAFVAGAGLSLAGSVLQTVTRNPLADPYLFGISSGASFGAVVMLTLFTGSGLFGN 145

Query: 112 PGAMASQ------------------FAALAGACVVGLIVFGVA-WGKRLSPVTLILAGLV 152
            G +A+                   F A  GA +  LIV  +A  G +     ++L+G+ 
Sbjct: 146 AGTIANSGIFSGSGTFAGLLWFSLPFGAFIGASLSVLIVLALAGLGLKSQVERMLLSGVA 205

Query: 153 VSLYCGAINQLLVIFHHDQ-LQSMFLWSTGTLTQTDWGGVERLWPQLLGGVMLTLLLL-- 209
            S    A+  LL+ F   Q   S+  WS G+  +  W  +  + P L+  V+L+  ++  
Sbjct: 206 TSFMFSALTSLLLYFASPQATASVLFWSLGSFAKASWSLL--VLPSLV--VLLSFFIILG 261

Query: 210 --RPLTLMGLDDGVARNLGLALSLARLAALSLAIVISALLVNAVGIIGFIGLFAPLLAKM 267
             R +  +   D  A  LG+ +   RL  L L  +I+A+LV   G IGF+GL  P   ++
Sbjct: 262 WKRQIMALQAGDETAHTLGVNVPKLRLNMLLLCSLITAILVATCGGIGFVGLMIPHTVRL 321

Query: 268 LGARRLLPRLMLASLIGALILWLSDQIILWLTRVWMEVSTGSVTALIGAPLLLWLLPR 325
           L   R    ++L +L+G L +   D +   L     E+  G +TA IG+   L +L R
Sbjct: 322 LFPGR--QPILLTALVGGLFMVWIDVLARCLLGN-QELPVGIITAAIGSFFFLLILRR 376