Pairwise Alignments

Query, 284 a.a., DNA-binding transcriptional regulator RclR from Escherichia coli ECOR27

Subject, 275 a.a., AraC-type DNA-binding domain-containing proteins from Pseudomonas stutzeri RCH2

 Score = 87.8 bits (216), Expect = 2e-22
 Identities = 65/235 (27%), Positives = 113/235 (48%), Gaps = 6/235 (2%)

Query: 42  HALTQGAAKLEMPTGEIFTLRPGNVVLLPQNSAHRLSHVDNESTCIVCGTLRLQHSARYF 101
           H L  G  +++     ++ +    ++L P+ + H L     +   +VC +L         
Sbjct: 39  HLLRAGRVRIQAERLLVYEIEEPTLILFPRPAPHALIADTADHAELVCASLTFDGGIDNP 98

Query: 102 LT-SLPETLFLAPVNHSVEYNWLREAIPFLQQESRSAMPGVDALCSQICATFFTLAVREW 160
           LT +LP  L L P++       L   + +L QE+ +   G  A+ +++        +R  
Sbjct: 99  LTLALPGHLLL-PLSQLPN---LAGNLEWLFQEAFNEECGRFAVLNRLFELMLIQLLRHL 154

Query: 161 IAQVNTEKNILSLLLHPRLGAVIQQMLEMPGHAWTVESLASIAHMSRASFAQLFRDVSGT 220
           +A       +++ L  PRL   +  M + P  AW+VE+LA   +MSRA FA  F ++ G+
Sbjct: 155 LATRTLSTGLMAGLADPRLARALTLMHDAPHQAWSVETLAQACNMSRAGFAARFHEIVGS 214

Query: 221 TPLAVLTKLRLQIAAQMFSREMLPVVVIAESVGYASESSFHKAFVREFGCTPGEY 275
           TP   L   R+ +  +   RE  P+ +IA+ VGY S S+  +AF R+ G +P E+
Sbjct: 215 TPADYLRGWRVSLVLKRL-REGRPIALIADEVGYESPSALSRAFRRKVGKSPREW 268