Pairwise Alignments

Query, 367 a.a., bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD from Escherichia coli ECOR27

Subject, 386 a.a., riboflavin biosynthesis protein RibD (RefSeq) from Shewanella loihica PV-4

 Score =  369 bits (946), Expect = e-106
 Identities = 190/361 (52%), Positives = 249/361 (68%), Gaps = 6/361 (1%)

Query: 3   DEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVHALRMAGEK 62
           D   MARA+KLA++G++TT PNPNVGCVIV+   +VGEG+H  AG PHAEVHALRMAG+K
Sbjct: 11  DSQMMARAIKLARKGQYTTSPNPNVGCVIVQGETLVGEGFHIAAGGPHAEVHALRMAGDK 70

Query: 63  AKGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDV 122
           AKGATAYVTLEPCSH+GRTPPC +ALI A V+RVV ++ DPNPQV+GRG+  LQ AGI V
Sbjct: 71  AKGATAYVTLEPCSHYGRTPPCAEALIKAEVSRVVVAVTDPNPQVSGRGIKMLQDAGILV 130

Query: 123 SHGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQR 182
             GL   EA  LN GF+KRMR+G P++ +KL  SLDG+TA+++G S+WIT P+ARRDVQR
Sbjct: 131 EVGLHQEEAAALNPGFMKRMRSGLPWVGIKLATSLDGKTALSNGVSKWITGPEARRDVQR 190

Query: 183 QRAQSHAILTSSATVLADDPALTVRWSELDEQTQALYPQQNLRQPVRIVIDSQNRVTPEH 242
            RA+  A++T   TVLADDP+L VR  EL   ++ L  + ++RQP+R+V+DS+ R+  + 
Sbjct: 191 MRARFDAVVTGIETVLADDPSLNVRHLELGSLSEQL-TEADIRQPLRVVLDSRARLGAKA 249

Query: 243 RIVQQPGETWFARTQ----EDSSEWPETVRTLLIPEHKGHLDLVVLMMQLGKQQINSIWV 298
           ++ +          Q      +S WPE V  L +P   G + L  L+  LG  Q+NS+ V
Sbjct: 250 KLFETQSPVLLVSCQPYPEAVASAWPEQVSQLQLPSDNGQVPLKALLEHLG-SQLNSVMV 308

Query: 299 EAGPTLAGALLQAGLVDELIVYIAPKLLGSDARGLCTLPGLEKLADAPQFKFKEIRHVGP 358
           EAG TLAGA +  GL DEL++Y APK+LG   R L  LP   ++   P  K  + R +G 
Sbjct: 309 EAGATLAGAFMAQGLADELVLYQAPKILGGHGRNLLALPDYTEMTQLPALKLCDERAIGA 368

Query: 359 D 359
           D
Sbjct: 369 D 369