Pairwise Alignments

Query, 90 a.a., DNA-binding protein HU-beta from Escherichia coli ECOR27

Subject, 90 a.a., DNA-binding protein, HU family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  144 bits (363), Expect = 2e-40
 Identities = 71/90 (78%), Positives = 84/90 (93%)

Query: 1  VNKSQLIDKIAAGADISKAAAGRALDAIIASVTESLKEGDDVALVGFGTFAVKERAARTG 60
          +NKS+LI+KIA+GADISKAAAGRALD+ IA+VTE LKEGD ++LVGFGTF V+ERA RTG
Sbjct: 1  MNKSELIEKIASGADISKAAAGRALDSFIAAVTEGLKEGDKISLVGFGTFEVRERAERTG 60

Query: 61 RNPQTGKEITIAAAKVPSFRAGKALKDAVN 90
          RNPQTG+EI IAAAK+P+F+AGKALKDAVN
Sbjct: 61 RNPQTGEEIKIAAAKIPAFKAGKALKDAVN 90