Pairwise Alignments

Query, 90 a.a., DNA-binding protein HU-beta from Escherichia coli ECOR27

Subject, 90 a.a., DNA-binding protein, HU family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  113 bits (283), Expect = 4e-31
 Identities = 56/90 (62%), Positives = 71/90 (78%)

Query: 1  VNKSQLIDKIAAGADISKAAAGRALDAIIASVTESLKEGDDVALVGFGTFAVKERAARTG 60
          +NK++LI KIA  ADI+KA A RAL +  A++TES+K GD +++VGFG+F    RAARTG
Sbjct: 1  MNKTELIAKIAENADITKAQATRALKSFEAAITESMKNGDKISIVGFGSFETTTRAARTG 60

Query: 61 RNPQTGKEITIAAAKVPSFRAGKALKDAVN 90
          RNPQTGKEI IA A VP F+AGK L+D+VN
Sbjct: 61 RNPQTGKEIQIAEATVPKFKAGKTLRDSVN 90