Pairwise Alignments

Query, 343 a.a., Multidrug resistance protein MdtN from Escherichia fergusonii Becca

Subject, 354 a.a., secretion protein HlyD family protein (RefSeq) from Shewanella loihica PV-4

 Score =  142 bits (357), Expect = 2e-38
 Identities = 105/334 (31%), Positives = 163/334 (48%), Gaps = 25/334 (7%)

Query: 11  SKFPALLVVALALVALVFVIWRVDSAPSTNDAYASADTIDVVPEVSGRIVELAVTDNQAV 70
           S+  +  ++ L LV  ++ +W     P T+DA   A  + V  EV+G I E++V DNQ V
Sbjct: 8   SRKMSFYIIGLILVVWLYSLWADRVTPMTSDARVHAYLVRVASEVAGNITEVSVRDNQIV 67

Query: 71  KQGDLLFRIDPRPYEANLAKAEASLAALDKQIMLTQRSVDAQQFGADSVNATVEKARAAA 130
           + G+ LF+IDPR Y   +  A+A+L+   + I  +  +V+  Q       A V  A AA 
Sbjct: 68  EAGEPLFQIDPRNYRLAMQSAQANLSLAGQNIGASTAAVEVAQ-------AKVVDAIAAR 120

Query: 131 KQASDTLRRTEPLLREGFVSAEEVDRARTAQRAAEADLNAVLLQAQSAASAVSGVDALVA 190
             A +   R   L  +G +S  E+D A  A+   +A+L A       A  A+        
Sbjct: 121 NNAKEQAARVSELAGQGVLSQAELDNAIEARDRTQANLEAAEASLVQARQALGPAGQDNP 180

Query: 191 QRAAVEADIALTKLHLEMATVRAPFDGRVISLKTSVGQFASAMRPIFTLIDTRHWYVIAN 250
           Q  A  A++   +L L+   V+AP  G V +L+ ++GQ A+   P+ T ID R  ++ A 
Sbjct: 181 QILAAMANLEKAQLDLQKTQVKAPSKGVVTNLQLTLGQRANVGSPMLTFIDPRGVWISAL 240

Query: 251 FRETDLKNIRSGTPATIRLMSDSGKTFEGKVDSIGYGVLPDDGGLVLGGLPKVSRSINWV 310
            RE  L++I+ G    I L +  G+  EGKVDSIG+G          GG   + ++  ++
Sbjct: 241 VRENSLEHIKVGNKVEIVLDALPGRVLEGKVDSIGWGT---------GGSNNIDQNTGFL 291

Query: 311 RV------AQRFPVKIMV--DKPDPEMFRIGASA 336
                   AQR+PV I+    KP P   R G+ A
Sbjct: 292 TADSNGIKAQRYPVNIVFTGTKP-PGNIRYGSQA 324