Pairwise Alignments

Query, 585 a.a., hypothetical protein from Escherichia fergusonii Becca

Subject, 458 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score =  169 bits (427), Expect = 3e-46
 Identities = 130/479 (27%), Positives = 204/479 (42%), Gaps = 69/479 (14%)

Query: 58  TVSVPPVTPAVVKSTFSTAQIDQWVAPVALYPDSLLSQVLMASTYPANVAQAVQWSHDNP 117
           T SV     AV +  FS A++ Q +AP+ALYPDSLL+ +L+ASTYP  V QA +W + N 
Sbjct: 21  TPSVSRAEDAVQEIQFSDAELAQMLAPIALYPDSLLTHILIASTYPLEVVQANRWRNKNK 80

Query: 118 LKQGDAAIQAVSGQSWDASVKSLVAFPQLMALMGENPQWVQNLGDAFLAQPQDVMDSVQR 177
             +G  A+     + WD SV +LVAFP L+  + ++ +W Q LGD FL   + V+DS+Q 
Sbjct: 81  SLEGAEAVNRAEKKDWDPSVTALVAFPDLLQRLSDDLEWTQKLGDTFLQDEERVLDSIQS 140

Query: 178 LRQLAQQTGSLKSSTEQKIITTTKKVVPVNQPANAPATQPNTVSTSSPVVAEPAPTVITI 237
           LRQ A++  +       K+    +++V                                I
Sbjct: 141 LRQQAERANAFDDMENMKVTKVNRQIV--------------------------------I 168

Query: 238 EPANPDVVYIPNYNPNVVYGSWANTAYPPVYLP-PPAGEPFVDSFVRG-FGYSMGVATTY 295
           EP   +V+Y+P Y+  VVYG W    YPPVY   PP    +    + G F ++ G+  ++
Sbjct: 169 EPVQREVIYVPYYDTRVVYGHWHWYNYPPVYWAYPPHYARYYPGHISGHFYFNSGIHISF 228

Query: 296 -ALFSSIDWDDDDHDHHHHDDDDYHHHDGGHRDGNDWQHNGDNINIDVNNFNRITGEHLT 354
              FS+  W         H    +HHH   +R                  ++RI     +
Sbjct: 229 NYFFSAFSW------RQRHIVVTHHHHTTRYRP-----------------YSRIV---TS 262

Query: 355 DKNMAWRHNPNYRNGVPYHDQDMAKRFHQTDVNGGMSATQLPAPTRDSQRQAAASQFQQR 414
                W H P +R+GV Y    +  R+ +   N              + +QA  SQ  + 
Sbjct: 263 SGAQRWHHKPVHRHGVAYRSPKVKARYDKYRPNRYDVKHNSSMERYSNSKQAKPSQ-AKH 321

Query: 415 THAAPVITRDTQ----RQAAAQRFNEAEHNGSYDDFRDFSRRQPLTQQQKDAARQRYQSA 470
            +AA V  R  Q    + + A+  ++   N      + + +R  L+   K A R     A
Sbjct: 322 YNAAQVQKRREQNFSHKLSDARSQHDRHQNAQKTPTKYYEKRDRLSLNDK-ANRSSSNKA 380

Query: 471 SPEQHQAVREKIQANPQNQQRREAARQRIQSASPEQRQAVREKMQTNPQNQQQRDAARQ 529
                +  REK      + QR   + QR   +   Q+Q+ + +    P    QR+ + Q
Sbjct: 381 DNRTKEWNREKSPQRNDSYQREMKSHQRDNKS--HQQQSYQRERSHQPVKSPQRERSHQ 437