Pairwise Alignments

Query, 547 a.a., Flagellar hook-associated protein 1 from Escherichia fergusonii Becca

Subject, 459 a.a., flagellar hook-associated protein FlgK from Pseudomonas stutzeri RCH2

 Score =  141 bits (356), Expect = 5e-38
 Identities = 138/544 (25%), Positives = 224/544 (41%), Gaps = 88/544 (16%)

Query: 1   MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGGWVGNGVYV 60
           MS L     SG+ A+Q AL     NI++ N  G++R    M        +   +G GV V
Sbjct: 1   MSVLSQIGYSGVRASQIALTATGQNIANVNTPGFSRLAPEMHSVGGQTASS--IGGGVQV 58

Query: 61  SGVQREYDAFITNQLRAAQTQSSGLTARYEQMSKIDNMLSTSTSSLATQMQDFFTSLQTL 120
           S ++R  + F   QL  A T  +      + ++ ++ ++ +  SS++  + +FF +L   
Sbjct: 59  SSIRRLSNDFQNQQLWRASTDKNYYGTSQQYLTALEGLIHSEGSSVSVGLDNFFAALSEA 118

Query: 121 VSNAEDPAARQALIGKSEGLVNQFKTTDQYLRDQDKQVNIAIGASVDQINNYAKQIASLN 180
            S  E  A RQ +IG+++ L  +F   +  +  Q   +     A V +IN  +  IA LN
Sbjct: 119 SSTPESIALRQQIIGEAKQLAQRFNGLNGNIGTQLNALQGQRVAMVAEINGLSGNIAELN 178

Query: 181 DQISRLTGVGAGASPNNLLDQRDQLVSELNQIVGVEVSVQDGGTYNITMANGYSLVQGST 240
            +I ++    AG     L D R+ L+ +L+Q  G+ V     GT  +++ANG  LV G+T
Sbjct: 179 AEILKME--SAGRDTATLRDYRENLIKDLSQYAGIRVQEVADGTLTVSLANGQPLVAGTT 236

Query: 241 ARQLAAVPSSADPSRTTVAYVDRTAGNIEIPEKLLNTGSLGGILTFRSQDLDQTRNTLGQ 300
           A QL    + A     T+ +   T   ++  E L   GSLG +       L   +  L  
Sbjct: 237 AGQLRVEQNLAGEQELTLVFAKTTFPLVQ--EGL--GGSLGALYDMEYGALRPAQADLHD 292

Query: 301 LALAFAEAFNTQHKAGFDANGDAGKDFFAIGKPAVLQNTKNNGDVAIGATVTDASAVLAT 360
           +A A A+  N     GFD NG+ G+  F                     T    S +LA 
Sbjct: 293 MAAALAQMVNDTLAGGFDLNGNPGQPLFVY-------------------TPGSTSGMLA- 332

Query: 361 DYKISFDNNQWQVTRLASNTTFTVTPDANGKVAFDGLELTFTGTPAVNDSFTLKPVSDAI 420
                       VT L        TP+   ++AF     + TG    N++          
Sbjct: 333 ------------VTAL--------TPE---QLAFSSAGQSGTGEVGNNENL--------- 360

Query: 421 VNMDVLITDEAKIAMASAEDAGDSDNRNGQALLDLQSNSKTVGGAKSFNDAYASLVSDIG 480
             + +L    AK+ +A +               D+  N    G       A     +D+ 
Sbjct: 361 --LALLELKSAKVNVAGS---------------DVPLNDAYAGLVGRVGSASRQNKADLA 403

Query: 481 NKTATLKTSSATQGNVVTQLSNQQQSISGVNLDEEYGNLQRFQQYYLANAQVLQTANAIF 540
             T   + + A + +V           S VNLDEE  NL  ++Q Y AN +V+ T+N +F
Sbjct: 404 AATVVAEQAQAQRDSV-----------SAVNLDEEAVNLMAYEQAYQANMKVISTSNDLF 452

Query: 541 DALI 544
           +A++
Sbjct: 453 NAVL 456