Pairwise Alignments

Query, 547 a.a., Flagellar hook-associated protein 1 from Escherichia fergusonii Becca

Subject, 641 a.a., flagellar hook-associated protein FlgK (RefSeq) from Shewanella sp. ANA-3

 Score =  177 bits (448), Expect = 1e-48
 Identities = 131/458 (28%), Positives = 198/458 (43%), Gaps = 29/458 (6%)

Query: 4   LINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGGWVGNGVYVSGV 63
           L+N A +G+ A+Q+ L   SNNI++ N AGY RQ    +   S      + G G YV  V
Sbjct: 5   LLNIARTGVLASQSQLGVTSNNIANANTAGYHRQVATQSTLESQRLGNSFYGTGTYVDDV 64

Query: 64  QREYDAFITNQLRAAQTQSSGLTARYEQMSKIDNMLSTSTSSLATQMQDFFTSLQTLVSN 123
           +R Y+ +   +LR  QT  SG  A Y ++S++D + S     +   +   FT L +L   
Sbjct: 65  KRIYNDYAARELRIGQTTLSGAEASYGKLSELDQLFSQIGKMVPQSLNSLFTGLNSLADL 124

Query: 124 AEDPAARQALIGKSEGLVNQFKTTDQYLRDQDKQVNIAIGASVDQINNYAKQIASLNDQI 183
             D   R + +  ++ L N        L  Q  Q N  I     +IN  +K++A+LN ++
Sbjct: 125 PADLGIRSSTLNDAKQLANSLNQMQSSLNGQMTQTNDQITGMTKRINEISKELANLNLEL 184

Query: 184 SRLTGVGAGASPNN---LLDQRDQLVSELNQIVGVEVSVQDGGTYNITMANGYSLVQGST 240
            +        SPN    LLD++D L+ EL+Q   V V  Q+ G  +I +     LV G  
Sbjct: 185 MK--------SPNQDAMLLDKQDALIQELSQYAQVNVIPQENGAKSIMLGGSVMLVSGEI 236

Query: 241 ARQLAAVPSSADPSRTTVAYVDRTAGNIEIPEKLLNTGSLGGILTFRSQDLDQTRNTLGQ 300
           A  +        P+   +     +      P KL   G LG +  +R Q L    + L Q
Sbjct: 237 AMTMDTKTGDPFPNELQLTSSIGSQSVAADPSKL--GGQLGALFEYRDQTLIPASHELDQ 294

Query: 301 LALAFAEAFNTQHKAGFDANGDAGKDFF--------AIGKPAVLQNTKNNGDVAIGATVT 352
           LAL  A+ FN     GFD NG  G + F        ++G+     N  N G+  +G  + 
Sbjct: 295 LALGIADNFNKMQAQGFDLNGQVGSNIFRDINDPLMSLGRVGGYSN--NTGNATLGVNID 352

Query: 353 DASAVLATDYKISFDNNQWQVTRLASNTTFTVTP-DANGKVAFDGLELTF---TGTPAVN 408
           D   +    Y++SF         L    T  +TP   NG     G   +     G  A  
Sbjct: 353 DTRLLTGGSYELSF--TAPASYELRDTETGVITPLTLNGSTLEGGAGFSIDIKAGAMASG 410

Query: 409 DSFTLKPVSDAIVNMDVLITDEAKIAMASAEDAGDSDN 446
           D F ++P + A   + V +TD   IA AS +   D+ N
Sbjct: 411 DRFVIRPTAGAANGITVEMTDPKGIAAASPKITADAAN 448