Pairwise Alignments

Query, 429 a.a., Ribosomal RNA small subunit methyltransferase B from Escherichia fergusonii Becca

Subject, 427 a.a., sun protein (RefSeq) from Shewanella loihica PV-4

 Score =  419 bits (1076), Expect = e-121
 Identities = 224/428 (52%), Positives = 290/428 (67%), Gaps = 7/428 (1%)

Query: 5   RNLRSMAAQAIEQVVEQGQSLSNILPPLQQKV-SDKDKALLQELCFGVLRTLSQSDWLIN 63
           +NLR++AA+ + QV+E+G SLS  LP  QQ++ S KDKALL ELC+GV+R L Q D L++
Sbjct: 2   KNLRALAARVVFQVLEKGVSLSVALPEQQQRLTSGKDKALLAELCYGVMRHLPQLDKLVS 61

Query: 64  KLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAVAIKRPQLKGLINGVLR 123
             M++P+ GKQR VH L++VG YQL +TRIP HAA++ET E    +K   L  ++NGVLR
Sbjct: 62  DCMSKPLKGKQRIVHQLLLVGCYQLYFTRIPGHAAISETAEACRQLKFEGLVKVVNGVLR 121

Query: 124 QFQRQQDELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRVNRTHH 183
             QR Q  L  E N + A +  P+WL+KRL+ AYP+ WQ ++  ++QRPPMWLR N+   
Sbjct: 122 NLQRNQKPL-PEDNETLA-FNTPAWLIKRLKAAYPDSWQEMIAQSHQRPPMWLRNNQLSQ 179

Query: 184 SRDSWLALLDEAGMKGFPHADYPDAVQLETPAPVHALPGFEEGWVTVQDASAQGCMTWLA 243
           +R+ +L LLDE  +   P A   DA+ LE+P  V  LPGF +G  +VQD +AQ   + LA
Sbjct: 180 TREQYLTLLDEQEIAATPGASN-DAILLESPKDVGMLPGFADGVASVQDGAAQWAASLLA 238

Query: 244 PQNGEHILDLCAAPGGKTTHILEVAPEAQVLAVDIDEQRLSRVYDNLKRLGMKATVKQGD 303
           P+  E ILD CAAPGGK+ H+LE  P   ++AVD D +RL RV  NL RL +KA +  GD
Sbjct: 239 PEANELILDACAAPGGKSCHLLESQPSIDLVAVDFDAKRLERVQQNLDRLSLKAKLVHGD 298

Query: 304 GRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWSH 363
                 W    +FDRILLDAPCSATGVIRRHPDIKWLR+  DI ELA LQS+ILD  W  
Sbjct: 299 AAKIDSWWQGDKFDRILLDAPCSATGVIRRHPDIKWLRKQADIEELATLQSQILDHCWQW 358

Query: 364 LKSGGTLVYATCSVLPEENSLQIKAFLQRTADAEL---CETGTPEQPGKQNLPGAEEGDG 420
           LK GGTL+YATCS+LP+EN+ QI AFL RT DA L    +    +  G Q  PG +  DG
Sbjct: 359 LKPGGTLLYATCSILPQENAEQIAAFLARTQDATLIPIAQQQNSDDIGWQITPGQDNMDG 418

Query: 421 FFYAKLIK 428
           F+YA+L+K
Sbjct: 419 FYYARLVK 426