Pairwise Alignments

Query, 429 a.a., Ribosomal RNA small subunit methyltransferase B from Escherichia fergusonii Becca

Subject, 428 a.a., sun protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  413 bits (1062), Expect = e-120
 Identities = 223/427 (52%), Positives = 284/427 (66%), Gaps = 7/427 (1%)

Query: 6   NLRSMAAQAIEQVVEQGQSLSNILPPLQQKV-SDKDKALLQELCFGVLRTLSQSDWLINK 64
           NLR++AA+AI  V+E+G SLS  LP  Q+ + S KDKALL ELC+GV+RTL Q +    +
Sbjct: 2   NLRALAAKAIFDVLEKGVSLSVALPEQQKHLASGKDKALLAELCYGVMRTLPQIEKRTAE 61

Query: 65  LMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAVAIKRPQLKGLINGVLRQ 124
            +A+P+ GKQR +H L++VG YQL +TRIP HAA++ET E    +K   +  ++NGVLR 
Sbjct: 62  CLAKPLKGKQRIIHQLLIVGCYQLYFTRIPSHAAISETAEACRQLKFEGMVKVVNGVLRN 121

Query: 125 FQRQQDELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRVNRTHHS 184
            QRQ   L  E  +    Y  P WL+KRL+ AYP  WQ I++ +++RPPMWLR NR   S
Sbjct: 122 IQRQLTPLSNE--SETLSYNTPGWLIKRLKTAYPGNWQEIIQQSHERPPMWLRNNRLSQS 179

Query: 185 RDSWLALLDEAGMKGFPHADYPDAVQLETPAPVHALPGFEEGWVTVQDASAQGCMTWLAP 244
           RD +LA LD+  +         DA+ L  P  V  LP F EG  +VQD +AQ   T LAP
Sbjct: 180 RDEYLAALDKLEIDASAGLS-DDAILLAAPKDVATLPLFLEGAASVQDGAAQWAATLLAP 238

Query: 245 QNGEHILDLCAAPGGKTTHILEVAPEAQVLAVDIDEQRLSRVYDNLKRLGMKATVKQGDG 304
           Q  E ILD CAAPGGK+ H+LE+ P  +++AVD D +RL RV  NL RL +KA V  GD 
Sbjct: 239 QANELILDACAAPGGKSCHLLELEPSIKLIAVDFDAKRLERVQQNLDRLSLKAEVIHGDA 298

Query: 305 RYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWSHL 364
                W   +QFDRILLDAPCSATGVIRRHPDIKWLR++ DI ELA+LQ +ILD  W  L
Sbjct: 299 ANIDSWWQGEQFDRILLDAPCSATGVIRRHPDIKWLRKNHDIEELAELQRQILDHCWKWL 358

Query: 365 KSGGTLVYATCSVLPEENSLQIKAFLQRTADAE---LCETGTPEQPGKQNLPGAEEGDGF 421
           K GGTL+YATCS+LP+EN  QI AFL RTADA+   L +  + +  G Q  PG    DGF
Sbjct: 359 KPGGTLLYATCSILPQENRDQISAFLARTADAKLDTLVQQASSQDIGWQITPGQHNMDGF 418

Query: 422 FYAKLIK 428
           +YA+L+K
Sbjct: 419 YYARLLK 425