Pairwise Alignments

Query, 186 a.a., sigma-70 family RNA polymerase sigma factor from Dyella japonica UNC79MFTsu3.2

Subject, 181 a.a., RNA polymerase subunit sigma-24 from Pseudomonas simiae WCS417

 Score = 65.1 bits (157), Expect = 7e-16
 Identities = 53/148 (35%), Positives = 81/148 (54%), Gaps = 10/148 (6%)

Query: 36  LRRRVSSEEDAQDIAQESLVRLIRYREHAPE--SWSSLLYRIAINALNDRARRAQSHYQH 93
           LR+R+ SE+ A D+  E+ +R+ R  E  P     ++ LYR+A+N   DR R+A +    
Sbjct: 24  LRKRLGSEDLANDVLHETYLRVDRM-EVPPNLAQPNAYLYRMALNIAADR-RQADARL-- 79

Query: 94  DHISLDEHAHGLVSND--QDHDQRIANQQELARLQQALLGLPARCREIYLLNRIEGMSYP 151
             ++  E    L S D  QD  + +  Q+E+  L +AL  LPAR R+I +  R+E   + 
Sbjct: 80  --LTGSEVEELLQSADEAQDPSRVVGGQKEIQSLVKALYELPARRRKILIAARLEEAPHL 137

Query: 152 EIARHCGISVKAVEKNISRALALLRKKL 179
           EI++  GIS + VEK I  AL    K+L
Sbjct: 138 EISQRFGISTRMVEKEIKAALGHCAKRL 165