Pairwise Alignments

Query, 186 a.a., sigma-70 family RNA polymerase sigma factor from Dyella japonica UNC79MFTsu3.2

Subject, 162 a.a., RNA polymerase sigma factor from Pseudomonas simiae WCS417

 Score = 61.6 bits (148), Expect = 7e-15
 Identities = 45/154 (29%), Positives = 75/154 (48%), Gaps = 11/154 (7%)

Query: 22  ESFVRDQRHALLAFLRRRVSSEEDAQDIAQESLVRLIRYREHAPESWS--SLLYRIAINA 79
           E    D  H L  +LRR++   E A D+AQ++ +R++  RE AP      + L  +A   
Sbjct: 8   EVLYNDHHHWLTGWLRRKLGCPESAADLAQDTFMRVLTARE-APTLIEPRAFLTTVAKRV 66

Query: 80  LNDRARRA--QSHYQHDHISLDEHAHGLVSNDQDHDQRIANQQELARLQQALLGLPARCR 137
           L +  RR   +  Y      + EH           ++R    Q L  L Q L GLP + +
Sbjct: 67  LFNFYRRQDLERAYLDALAQMPEHVA------PSEEERAIILQTLVELDQLLDGLPVQVK 120

Query: 138 EIYLLNRIEGMSYPEIARHCGISVKAVEKNISRA 171
             +LL + +G++Y +I    GIS+  V++++S+A
Sbjct: 121 RAFLLAQCDGLTYAQIGAELGISIATVKRHLSKA 154