Pairwise Alignments

Query, 186 a.a., sigma-70 family RNA polymerase sigma factor from Dyella japonica UNC79MFTsu3.2

Subject, 191 a.a., RNA polymerase sigma-70 factor, ECF subfamily from Pseudomonas putida KT2440

 Score = 77.0 bits (188), Expect = 2e-19
 Identities = 54/167 (32%), Positives = 78/167 (46%), Gaps = 3/167 (1%)

Query: 15  AGNAPRFESFVRDQRHALLAFLRRRVSSEEDAQDIAQESLVRLIRYREHAPESWSSLLYR 74
           AG   RF    + QR  + A + RRV     A D+ QE  +R  R  E   E+  + L R
Sbjct: 15  AGARARFVQVFQAQRARMEALVSRRVGCRATASDLVQELFLRFWRRPEVKVEALDTYLLR 74

Query: 75  IAINALNDRARRAQSHYQHDHISLDEHAHGLVSNDQDHDQRIANQQELARLQQALLGLPA 134
            A N   D  R   S  +    ++      L    Q  +Q +    +L R++  L  LP 
Sbjct: 75  CAGNLAIDHLRSESSRERVAEAAVPVSEASLA---QAPEQAVEVDHDLQRIEATLRALPE 131

Query: 135 RCREIYLLNRIEGMSYPEIARHCGISVKAVEKNISRALALLRKKLCD 181
           R R+I+LLNRI G  Y EIA+   +S  AVEK++ RAL   +  + +
Sbjct: 132 RTRQIFLLNRIHGCKYSEIAKAMQLSQSAVEKHMMRALEACKASVAE 178