Pairwise Alignments

Query, 186 a.a., sigma-70 family RNA polymerase sigma factor from Dyella japonica UNC79MFTsu3.2

Subject, 374 a.a., putative RNA polymerase sigma-70 factor, ECF subfamily/transmembrane sensor protein from Pseudomonas putida KT2440

 Score = 72.0 bits (175), Expect = 1e-17
 Identities = 53/157 (33%), Positives = 79/157 (50%), Gaps = 6/157 (3%)

Query: 32  LLAFLRRRVSSEEDAQDIAQESLVRLIRYREHAPESWS--SLLYRIAINALNDRARRAQS 89
           LL FL RR+S  + A D+AQE+ ++L+   E A       S ++R+A N   D  RR Q 
Sbjct: 20  LLQFLTRRMSDRQRAADVAQETYLKLVNIDEQAVPVLHARSFIFRVAGNLAIDALRREQR 79

Query: 90  -HYQHDHISLDEHAHGLVSNDQDHDQRIANQQELARLQQALLGLPARCREIYLLNRIEGM 148
               HD     + A  +       +  +  ++ L  L QALL LP   R+  LLNR+EG+
Sbjct: 80  IAASHDD---SDGACEVACPAPAPEAALLARERLQILDQALLQLPDNARQALLLNRVEGL 136

Query: 149 SYPEIARHCGISVKAVEKNISRALALLRKKLCDQGEA 185
           +  ++A+  G+S   V K I +AL   R +L   G A
Sbjct: 137 TQKQVAQRLGVSESMVAKYIGQALRHCRGRLKQAGVA 173