Pairwise Alignments

Query, 186 a.a., sigma-70 family RNA polymerase sigma factor from Dyella japonica UNC79MFTsu3.2

Subject, 171 a.a., RNA polymerase sigma-70 factor, ECF subfamily from Pseudomonas putida KT2440

 Score = 64.7 bits (156), Expect = 8e-16
 Identities = 47/144 (32%), Positives = 80/144 (55%), Gaps = 9/144 (6%)

Query: 32  LLAFLRRRVSSEEDAQDIAQESLVRLIRYREHAP-ESWSSLLYRIAINALNDRARRA--Q 88
           L  +LR RV   E A D+AQ++ VRL+R R+ +P +   + L  IA   + D+ RR   +
Sbjct: 23  LRGWLRSRVGCSEHAADLAQDTFVRLLRARQMSPLKEPRAYLSSIARGLMIDQFRRRALE 82

Query: 89  SHYQHDHISLDEHAHGLVSNDQDHDQRIANQQELARLQQALLGLPARCREIYLLNRIEGM 148
             YQ     L E     V +++D   ++     L RL +AL  L  R R+ +LL +++G+
Sbjct: 83  RAYQEGLAHLPEAE---VPSEED---KLVILDSLERLDRALQQLKPRVRQAFLLAQLDGL 136

Query: 149 SYPEIARHCGISVKAVEKNISRAL 172
           S  ++A+  G+S   VE+++++AL
Sbjct: 137 SIVQVAQRLGVSRATVERDLAKAL 160