Pairwise Alignments

Query, 884 a.a., sensor histidine kinase KdpD from Dyella japonica UNC79MFTsu3.2

Subject, 900 a.a., two component sensor kinase from Agrobacterium fabrum C58

 Score =  645 bits (1665), Expect = 0.0
 Identities = 363/887 (40%), Positives = 526/887 (59%), Gaps = 8/887 (0%)

Query: 1   MSDLSRDLRADALLDSVQEERHRRLKIFLGAAPGVGKTFAMLSAARELKRQGVDVVIGLV 60
           +SD+      DALL++ Q E   RLKIFLGAAPGVGKT+ ML + R     GVD VIG+V
Sbjct: 5   ISDMPSRPSPDALLENAQREARGRLKIFLGAAPGVGKTYEMLMSGRAKLADGVDTVIGVV 64

Query: 61  ETHGRAETEALVDGLEVLPRRQVEYRGRDFTEFDLDAALARKPAVLLVDELAHRNLPGGR 120
           ETHGR ETEALV+GL V+PR++++YRG+   E D+DA LAR+PA++LVDELAH N  G R
Sbjct: 65  ETHGRRETEALVEGLSVVPRKRIDYRGQVLEEMDIDAILARRPALVLVDELAHTNAAGSR 124

Query: 121 HERRWQDIAELLDAGIEVYSALNVQHLESLNDQVRRITNVTVRETVPDAFLDRARDIVLV 180
           H +R+ D+ E+L  GI VY+ LN+QH+ESLND V +IT + VRETVPD+ +DRA D+ ++
Sbjct: 125 HPKRYMDVQEILAQGINVYTTLNIQHVESLNDVVAQITRIRVRETVPDSIIDRADDVEII 184

Query: 181 DLPPRELIQRLKQGKVYVPETAAAALDAFFSPTNLAALRELAVDTVAGHVDSDLRGHML- 239
           D+ P +LI+RL+ GKVY+P TA  A++ +FS  NL ALRELA+   A  VD  L  HM  
Sbjct: 185 DITPDDLIKRLQDGKVYLPRTARRAIENYFSRGNLTALRELALRRTAQRVDEQLLNHMQS 244

Query: 240 -ARGGAMPVRRRVLAAIDGHGQSEYLVRVARRIAERRGAPWSVAFVDT--GAGLDDKRRE 296
            A  G      RVL  +D       LVR ARR A+R  APW+   +DT     L +  ++
Sbjct: 245 HAISGPWAAGDRVLVCLDHGRNGPGLVRYARRQADRLRAPWTALHLDTPRSQQLSEAEKD 304

Query: 297 QLDAAMRLARRLGGDAIVLRGHAVADEILAHADREGVGQILLGRTRERPLVRMLGRSLTQ 356
           +L   MRLA++LGG+ + L    +  EI+A+A+      I++GR R+    R+  RSLT 
Sbjct: 305 RLAGTMRLAQQLGGETVTLPALDLTREIIAYANANNFTHIIIGRPRKSWWQRIFQRSLTH 364

Query: 357 QLLRRGAHLELTIIATPTERAQSRLRLRMPGGRGRRG--EYLYATLAALVAFVLAFIADR 414
            L+     + + +I+      +    +++   R  +    YL +TL   +A ++  + D+
Sbjct: 365 DLIDHAGDISVHVISGDKNEEKPGQAVKLAPARSPQSFRSYLNSTLFVGLAIIVGIVLDQ 424

Query: 415 YLSVANLALIFLTAVLVVAVRTRMAVAVYTATLCFVGYNFFFAPPRYTLMIANVDDVLAV 474
            L V NLAL+FL AVL  AVR  +  A+Y + L  + +NFFF  PRYTL +++ D ++A+
Sbjct: 425 TLDVQNLALVFLMAVLAAAVRGGLGPALYASLLGALAFNFFFLEPRYTLTVSSPDSLVAL 484

Query: 475 CLFFVAALVCSRLATRLSSQVESMRAAHAQARALLALGQRLTASTDASGIRDVGAAALAR 534
             +F  ALV S L   +  Q  S R+       L    ++L  +     +    A  +A 
Sbjct: 485 LFYFGVALVASNLTVAVQRQAASARSRARTTEDLYLFSKKLAGTGTLDDVLWAAAYQMAS 544

Query: 535 ALRCDAAILMRDPGRVLQVASVSPRDFRLAAQDLGAADWSEKHAEPAGRYTDTLNAAPCW 594
            L+    +LM + G +   A   P D  L   D+ AA W+ +H + AGR  DTL  A   
Sbjct: 545 MLKVRVVLLMPENGAIAVKAGYPPDD-TLVDADIAAAQWAWEHNKAAGRGADTLPGAKRL 603

Query: 595 VLPLGSESRPLGVAAMRFAPEQRDLSPDQRSLAMAMVQDIGQALERARLADELEGARVQG 654
            LPL + S  +GV  +        L+P+Q+ L  A+      A+ER +LA +++ AR+  
Sbjct: 604 YLPLRTGSGAVGVVGLDDDRSGPLLTPEQQRLFDALADQAALAVERIQLASDVDRARLAA 663

Query: 655 ETERLRNALLSSVSHDLRSPLASMIGSAGTLSSYGEQLPSQERQELLDAILGEGQRLDRY 714
           ET+RLR ALL+S+SHDL++PLA+++GSAGTL  + + +P   R ELL  I+ E +RL+R+
Sbjct: 664 ETDRLRTALLTSISHDLKTPLAAILGSAGTLKDFADDIPPDARAELLSTIVEESERLNRF 723

Query: 715 IQNLLDMTRLGHGTLKLNRDWTDVAEIVAAAVTRLHKLFPELKVDTMLPTGTLLLYVHPA 774
           I NLLDMTR+G G ++ N     + ++V  A++R  K+    +V   +P+   +L V P 
Sbjct: 724 ISNLLDMTRIGSGAMEPNYGLHFLGDMVGTALSRAAKIVVRHEVVLDIPSDLPMLKVDPV 783

Query: 775 LIEQALFNILENAARFSPPGEAVRVLVRTEGDRLVLDVVDRGPGIPEDERARIFDMFYSV 834
           L EQ LFN+++NAA+++P    + +    +G  + L V D GPGIP D+  R+FD FY V
Sbjct: 784 LFEQVLFNLIDNAAKYAPEHTTIAIRGWRQGKNIFLSVADEGPGIPPDDLERVFDSFYRV 843

Query: 835 SRGDRAPQGTGLGLAICRGMIGAHGGSVEA-LPGDGGGTTIRITLPL 880
            + D    GTGLGL+IC+G I A GGS+ A    D GG    I LP+
Sbjct: 844 RKVDHVQAGTGLGLSICKGFIEAMGGSIRAENRADRGGAQFTIGLPV 890