Pairwise Alignments

Query, 727 a.a., primosomal protein N' from Dyella japonica UNC79MFTsu3.2

Subject, 732 a.a., Primosome factor n from Escherichia coli BL21

 Score =  634 bits (1636), Expect = 0.0
 Identities = 335/739 (45%), Positives = 460/739 (62%), Gaps = 27/739 (3%)

Query: 4   VLRVALPVPLPTLFDYLPPAAGEARPGSRVLVPFGRGKA-VGVVVETEVESALGGARLKQ 62
           V  VALPVPLP  FDYL P     + G RV VPFG+ +  +G+VV     S L    LK 
Sbjct: 3   VAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKA 62

Query: 63  ALRLLDDTPLLDAELMKTLAWAADYWLGAPGEAYANALPLALREDKPLPDTHEEVWALTV 122
            + +LD  P+    + + L WAADY+    G+   +ALP+ LR+ +P  +     W  T 
Sbjct: 63  VVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATE 122

Query: 123 AGRSALDAGSRKGGSRRLLETLAAAPLGAAELHERLPDWRD----------AARRLAAAG 172
            G+ A+D  S K   ++  + LAA   G          WRD          A + L   G
Sbjct: 123 QGQ-AVDLNSLKRSPKQQ-QALAALRQGKI--------WRDQVATLEFNDAALQALRKKG 172

Query: 173 LIERVRREADAAPQPVTAAPA-----LSAEQHAAVDAVGAELGRFQPFLLDGVTGSGKTE 227
           L +      + +      A +     L+ EQ  AV A+ +    F  +LL GVTGSGKTE
Sbjct: 173 LCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTE 232

Query: 228 VYLALIERVIAEGKQALLLVPEIGLAPQTVRRVRERLGVPVEVLHSNLAEGDRARAWLRA 287
           VYL+++E V+A+GKQAL++VPEIGL PQT+ R RER   PVEVLHS L + +R  AWL+A
Sbjct: 233 VYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKA 292

Query: 288 RDGEARVILGTRSAVFTPLPRAGLIVVDEEHDGAYKQQEGFRYHARDLALLRGRALGVPV 347
           ++GEA +++GTRSA+FTP    G+IV+DEEHD +YKQQEG+RYHARDLA+ R  +  +P+
Sbjct: 293 KNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPI 352

Query: 348 LLGSATPSLESLANVEAGRYRALHLRARPGAIRPPQVQIVDMRAQRLEHGLSPTLLAAVA 407
           +LGSATP+LE+L NV+  +YR L L  R G  RP    ++D++ Q+++ GL+P L+  + 
Sbjct: 353 ILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMR 412

Query: 408 DAVARGEQALVFRNRRGYAPVLLCHQCGWHAECPRCEHPLTLHAGRRQLICHHCDYHARL 467
             +    Q ++F NRRG+AP LLCH CGW AECPRC+H  TLH  +  L CHHCD    +
Sbjct: 413 QHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPV 472

Query: 468 PEHCPSCDAPDLKPQGQGTERLEEALAARFPDTPVLRIDRETTRRRDAFDELLERLRGEG 527
           P  CPSC +  L P G GTE+LE+ LA  FP  P+ RIDR+TT R+ A ++ L  +   G
Sbjct: 473 PRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGG 532

Query: 528 PAILVGTQMLAKGHDLPNLTLVAIVGVDEGLHSVDFRASERLAQLIVQVAGRAGRASKPG 587
             IL+GTQMLAKGH  P++TLVA++ VD  L S DFR++ER AQL  QVAGRAGRA K G
Sbjct: 533 ARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQG 592

Query: 588 RVILQTHHPDHPLLRQLLAQGYAAAAKELLAERRSVQLPPYMHQVLLRADAHQREHVEAF 647
            V+LQTHHP+HPLL+ LL +GY A A++ LAERR +QLPP+   V++RA+ H  +H   F
Sbjct: 593 EVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLF 652

Query: 648 LHEAYGMLLPA-AAQAELAIAGPMPAPMPLRAGRHRGQLLVEAGSRAVLHAALRPWARGL 706
           L +   ++L +  A  +L + GP+PA  P R GR R Q+L++  SR  L   +      +
Sbjct: 653 LQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALI 712

Query: 707 SALPSARRVRWSLDVDPVD 725
           + +P +R+V+W LDVDP++
Sbjct: 713 NTIPDSRKVKWVLDVDPIE 731