Pairwise Alignments

Query, 310 a.a., AraC family transcriptional regulator from Dyella japonica UNC79MFTsu3.2

Subject, 274 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

 Score =  122 bits (307), Expect = 7e-33
 Identities = 80/266 (30%), Positives = 120/266 (45%), Gaps = 8/266 (3%)

Query: 3   RPTRSDDWIHIRRDHDTGIESVHAHFRGHAYDPHDHDEVLVGVTQQGIQQFRCHRIVHRS 62
           +P    DW+ IR     GIE + A F  H YDPH HD   +G T  G+Q F     +   
Sbjct: 6   KPLPPSDWV-IRSAQPGGIERIEAWFGSHGYDPHRHDTYSIGRTLAGVQSFHYKGSLRHG 64

Query: 63  TAGRVILIEPGAVHDGDAPEDVGFTYAMLYLPQRWLAGMAGRLELPNASGIGAAFRNTVA 122
             G  +++ P  +HDG A  D GF Y M Y+    +  + G   LP  +G  ++      
Sbjct: 65  IPGNTLVLHPDELHDGMAGTDAGFRYRMAYVDPALIQNVLGGQPLPFIAGGLSSDPRLYH 124

Query: 123 IDDGLREIIQNAFLALHGNEARLARDQCLDELVRRLSAQAGELALPEAGSTDQLLRARDF 182
             +   + + +A   L   +A       L +L   L A  G+    +        RAR F
Sbjct: 125 ASEAFVQAVDHALEPLEEQDA-------LYDLAIALRAVGGKPRGRKRLDYQAAERARAF 177

Query: 183 LHDRMAGDIGLDELARHSGMDRFRLTRQFKRRFGQSPHAYLVRLRLRAARALLAGGGEPN 242
           + + +   I LD L + SG +R+ L+R F+  +G SP+ ++   RL   R ++  G    
Sbjct: 178 IMEHLHVGITLDMLEQASGRERWSLSRDFRTLYGTSPYRFVTLRRLDCLRRMILDGFTLV 237

Query: 243 QVALDVGFADQSHLGRWFQRAYRLSP 268
             AL  GF DQSH+ R F R Y + P
Sbjct: 238 DAALAAGFHDQSHMTRHFTRCYGVPP 263