Pairwise Alignments

Query, 568 a.a., nitrogenase MoFe cofactor biosynthesis protein NifE domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 511 a.a., nitrogenase molybdenum-iron protein subunit beta from Magnetospirillum magneticum AMB-1

 Score = 59.7 bits (143), Expect = 3e-13
 Identities = 82/342 (23%), Positives = 133/342 (38%), Gaps = 54/342 (15%)

Query: 54  RACVFCGSRVVLYPIADALHLVHGPVGCAAYTWDIRGALSSGPELHRLSFSTDLGERDII 113
           +AC   G+        + L  VHG  GCAAY    R  L+   +      S  + E   +
Sbjct: 68  KACQPLGAVFAAAGFEETLPYVHGSQGCAAY---FRSHLARHFKEASACVSDSMTEDAAV 124

Query: 114 FGGEPKLEAALDELITRHAPKAAFVYATCIVGLIGDDIGAVCKRVAARHGIPV-LPV--- 169
           FGG   L   L      + PK   V  TC+  +IGDD+ A       +  +P   PV   
Sbjct: 125 FGGLNNLVEGLLNAKHLYKPKMIAVSTTCMAEVIGDDLSAFIATAKEKESVPADFPVPFA 184

Query: 170 QSEGFKGNKREGYEAACAAMFTL--------TGTGATDGIGPASVNILGDFN--LAGELW 219
            +  F G+   GY+     +F            TGA++G     +NI+  F+        
Sbjct: 185 HTPSFVGSHTVGYDNMIKGIFNYFWDREKGEVKTGASNG----KINIIPGFDGYAVANNR 240

Query: 220 IIRGYLERMGVQ--VVANIT---------------GDGRVDDLRRCHGAALNL---VQCS 259
            ++ YL+ MGV   +V +++               G  ++DD+R    A   L     CS
Sbjct: 241 ELKRYLDAMGVDYTLVGDVSEVFDTPTDGTFRMYDGGTKLDDVRDAINAKATLGLQHYCS 300

Query: 260 GATMPLARMMREAYGTPTLRVSY-LGIEDMADSLYNVAEHFREVCPGIVERTRDLVREEI 318
             T+        + G  T  ++Y +G+      L  ++E   +  P  +E+ R  + + I
Sbjct: 301 DKTLEYV----ASKGQATASLNYPMGVSGTDAMLMKISELSGKAIPEAIEKERGRLVDAI 356

Query: 319 ATLMPRLRQLRRDLEGKRAAIYVGGAFKAFSLIKAFRHLGMQ 360
           A         +  L GK+AAI+ G      S+      LG++
Sbjct: 357 A-------DSQGWLHGKKAAIF-GDPDFVLSMASFLMELGIE 390