Pairwise Alignments

Query, 1346 a.a., tail fiber protein, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 775 a.a., hypothetical protein from Magnetospirillum magneticum AMB-1

 Score =  114 bits (285), Expect = 3e-29
 Identities = 125/403 (31%), Positives = 175/403 (43%), Gaps = 72/403 (17%)

Query: 1   MKADVVSVTGCPHPFRP--GDRVHDV---VPVGGTLESIVVRGLDDMGVPEALRG----- 50
           M A +V VT   +PF P     VH V   + VGG L+   +        PE L G     
Sbjct: 1   MTASIVIVT---NPFEPVASRSVHAVEAGITVGGLLQGCGIAEDCWSDGPEILIGGMTVP 57

Query: 51  ----CGHAFVDGEYVPRDRWADVTPRAGSTVTYRLVPAGGGGGSKALRGLLTVAVIALAV 106
                  A  D E V   RW    P+ G           GGGG   +R +LT+AV+  A+
Sbjct: 58  VGIYAVRAISDSEVVTVIRW----PQGGG--------GDGGGGKNPMRIVLTIAVMVAAI 105

Query: 107 VSQQYYLATYGTTFTTAAGVTAYTAGSMAASAAVAAAVTGAGMLAINSLVPLRPASLSQ- 165
                YL   G     A G TA  AGS AA A    A+  AG + IN+++P    S+   
Sbjct: 106 -----YL---GPMAAVAMGYTA--AGSAAAMATAGIAL--AGSMLINTVIPAPKPSMPSL 153

Query: 166 ---GTASSAADSPTYSIEGARNTLRPWGTVPLLLGRHRIVPPQCAMPYTEVVGNDQYVRQ 222
              G+ S+ A SPTYSI+   N  R    +P++ GRH I P   + PY + VG +QY+ Q
Sbjct: 154 NWGGSGSAPAPSPTYSIQAQGNQGRLGQPIPVIYGRHLIYPDLASEPYQDYVGGEQYLYQ 213

Query: 223 LFCLGYAEMQIETGFRLGETDINAYSDVQLEVLPFADKTSRPAHYSNDVY-------EQS 275
           L  +G  E  +E   R+ +T I+++ +VQ E +P     SR   +  DV        ++ 
Sbjct: 214 LHVIGQGEYAVEQ-IRIEDTPISSFEEVQTETVP---PGSRVTLFEPDVVTAAEVAGQEL 269

Query: 276 LSVQLKQSG--GWQMRTTPQACD----RIDIDISLPRGLVQFNDRAQKVERTV------- 322
           ++  L QSG  G+    T    D     + ID+ +PRGL   ND      R+V       
Sbjct: 270 VAPNLVQSGDDGYIGPFTANPVDTTAGALGIDVVMPRGLYYANDGGSLDSRSVQWQVEAR 329

Query: 323 LIEAQYAPKGSQAWASLGGPLQVGATSYQFERA-RQQVKVGEY 364
            I+A+    G   W  L  P    AT+     + R  V  G Y
Sbjct: 330 AIDAEGGAIG--GWVVLAQPSHSAATNSALRLSFRYSVSPGRY 370



 Score = 91.7 bits (226), Expect = 2e-22
 Identities = 94/356 (26%), Positives = 145/356 (40%), Gaps = 18/356 (5%)

Query: 466 TAAQTSALRRTVGVDVPTGQYDVRVRRITADTDDSKIADETWWGVLRSTRKIAPLRFSRP 525
           +AA  SALR +    V  G+Y+VR++R+       +   E  WG LR+     P      
Sbjct: 350 SAATNSALRLSFRYSVSPGRYEVRLKRLDTKDTAERAGHEIRWGALRAYLTGQP--DFGA 407

Query: 526 LCVVSTRIRATGQLNGALDE-LNCIAQTVCLDWDKATRTWVRRPTSNPASLFRYVLQGPA 584
           + +++ ++RAT  L+      +N IA      W  A      +PT + A  F    +   
Sbjct: 408 VTLLAVKMRATDNLSQRSSRMINVIATRKLPVWSAAGGWSAPQPTRSIAWAFADACKADY 467

Query: 585 IARPVPDDRIDLDQLAYWHEFCERRRLTYNRVHDYTASVEEVLDDVAAAGLAGRARPNGK 644
            A+ + D RIDL  L         R   ++ V D + +V E L  +A  G A   +  G 
Sbjct: 468 GAK-LADSRIDLKTLTTLDAVWAARGDFFDAVFDTSMTVWEALTRIARCGRAVPIQQGGI 526

Query: 645 WSVVIDEPRTRVAQHFSPR--TSWGFRSTKALPQQPHAWRVRF-VNATQDWKQDERIVYA 701
             ++ D P+T     F PR      F+    +P    A  V     +++ WK DE     
Sbjct: 527 VRIIRDAPQTMPVAMFGPRNIVKGSFKIKYVMPGDDTADAVTVEYFSSRTWKPDETTAKL 586

Query: 702 DGYDADNATVFEGLELPGVTDPEQVWVLGRHHIACARLRPEEYELYADMEHLVCTRGDLV 761
                DN      + L G T  +     G +  A  R R        ++E ++ T GDLV
Sbjct: 587 ADSAGDNPA---KVNLFGCTAKDHAQREGLYIAANNRYRRRMVTFRTELEGMIPTYGDLV 643

Query: 762 VVQHDVPMWG----VASGRVKSV----AGQVLTVDEPVGMEAGQAYRIRWRSADGA 809
            + HD+P WG    V   R +S      G VL + EP+    G  + +  R  DG+
Sbjct: 644 AITHDMPRWGQGGEVIDWRAESAKLPWVGAVLVLSEPLTWTEGATHYLALRRRDGS 699