Pairwise Alignments

Query, 1346 a.a., tail fiber protein, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 775 a.a., hypothetical protein from Magnetospirillum magneticum AMB-1

 Score =  120 bits (300), Expect = 6e-31
 Identities = 122/402 (30%), Positives = 177/402 (44%), Gaps = 70/402 (17%)

Query: 1   MKADVVSVTGCPHPFRP--GDRVHDV---VPVGGTLESIVVRG----------LDDMGVP 45
           M A +V VT   +PF P     VH V   + +GG L+   +            +  M VP
Sbjct: 1   MTASIVIVT---NPFEPVTSRSVHAVESGITLGGLLQGCSIAEDCWSDGPEILIGGMAVP 57

Query: 46  EALRGCGHAFVDGEYVPRDRWADVTPRAGSTVTYRLVPAGGGGGSKALRGLLTVAVIALA 105
             +     A  DGE V   RW    P+ G          GGGGG   +R +LT+AV+  A
Sbjct: 58  VGIYAV-RAIADGEVVTVIRW----PQGGG--------GGGGGGKNPMRIVLTIAVMVAA 104

Query: 106 VVSQQYYLATYGTTFTTAAGVTAYTAGSMAASAAVAAAVTGAGMLAINSLVPLRPASLSQ 165
           +     YL   G     A G TA  AGS AA A    A+ G+  + IN+++P    S+  
Sbjct: 105 I-----YL---GPMAAVAMGYTA--AGSAAAMATAGIAMVGS--VLINTVIPAPKPSMPS 152

Query: 166 ----GTASSAADSPTYSIEGARNTLRPWGTVPLLLGRHRIVPPQCAMPYTEVVGNDQYVR 221
               G+ S+ A SPTYSI+   N  R    +P++ GRH I P   + PY + VG +QY+ 
Sbjct: 153 LNWGGSGSAPAPSPTYSIQAQGNQGRLGQPIPVIYGRHLIYPDLASEPYQDYVGGEQYLY 212

Query: 222 QLFCLGYAEMQIETGFRLGETDINAYSDVQLEVLPFADKTSRPAHYSNDVY-------EQ 274
           QL  +G  E  +E   R+ +T I+++ +VQ E +P     SR   +  DV        ++
Sbjct: 213 QLHVIGQGEYAVEQ-IRIEDTPISSFEEVQTETVP---PGSRVTLFEPDVVTAAEVAGQE 268

Query: 275 SLSVQLKQSG--GWQMRTTPQACD----RIDIDISLPRGLVQFNDRAQKVERTVLIEAQY 328
            ++  L Q G  G+    T    D     + ID+ +PRGL   ND      RTV  + + 
Sbjct: 269 LVAPNLAQPGDDGYIGPFTANPVDTTVGALGIDVVMPRGLYYANDGGSLDSRTVQWQVEA 328

Query: 329 APKGSQ-----AWASLGGPLQVGATSYQFERA-RQQVKVGEY 364
               ++      WA L  P    AT+     + R  V  G Y
Sbjct: 329 RAINAEGGAIGGWAVLAQPSHSAATNSTLRLSFRYSVSPGRY 370



 Score = 95.1 bits (235), Expect = 2e-23
 Identities = 95/356 (26%), Positives = 148/356 (41%), Gaps = 18/356 (5%)

Query: 466 TAAQTSALRRTVGVDVPTGQYDVRVRRITADTDDSKIADETWWGVLRSTRKIAPLRFSRP 525
           +AA  S LR +    V  G+Y+VR++R+       +   E  WG LR+     P      
Sbjct: 350 SAATNSTLRLSFRYSVSPGRYEVRLKRLDTKDTAERAGHEIRWGALRAYLTGQP--DFGA 407

Query: 526 LCVVSTRIRATGQLNGALDEL-NCIAQTVCLDWDKATRTWVRRPTSNPASLFRYVLQGPA 584
           + +++ ++RAT  L+     + N IA      W  A      +PT + A  F    +   
Sbjct: 408 VTLLAVKMRATDNLSQRSSRMINVIATRKLPVWSAAGGWSAPQPTRSIAWAFADACKADY 467

Query: 585 IARPVPDDRIDLDQLAYWHEFCERRRLTYNRVHDYTASVEEVLDDVAAAGLAGRARPNGK 644
            A+ + D RIDL  LA        R  +++ V D + +V E L  +A  G A   +  G 
Sbjct: 468 GAK-LADSRIDLKTLAALDAVWAARGDSFDAVFDTSMTVWEALTRIARCGRAVPIQQGGI 526

Query: 645 WSVVIDEPRTRVAQHFSPR--TSWGFRSTKALPQQPHAWRVRF-VNATQDWKQDERIVYA 701
             ++ D P+T     F PR      F+    +P    A  V     +++ WK DE  V  
Sbjct: 527 VRIIRDAPQTMPVAMFGPRNIVKGSFKIKYVMPGDDTADAVTVEYFSSRTWKPDETTVKL 586

Query: 702 DGYDADNATVFEGLELPGVTDPEQVWVLGRHHIACARLRPEEYELYADMEHLVCTRGDLV 761
                DN      + L G T  +     G +  A  R R        ++E ++ T GDLV
Sbjct: 587 ADSQGDNPA---KVNLFGCTAKDHAQREGLYIAANNRYRRRMVTFRTELEGMIPTYGDLV 643

Query: 762 VVQHDVPMWG----VASGRVKSV----AGQVLTVDEPVGMEAGQAYRIRWRSADGA 809
            + HD+P WG    V   R +S      G VL + EP+    G ++ +  R  DG+
Sbjct: 644 AITHDMPRWGQGGEVIDWRAESAKPPWTGAVLMLSEPLTWTEGASHYLALRRRDGS 699