Pairwise Alignments

Query, 500 a.a., transcriptional regulator, GntR family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 470 a.a., Uncharacterized HTH-type transcriptional regulator YjiR from Escherichia coli ECRC99

 Score =  281 bits (720), Expect = 3e-80
 Identities = 164/461 (35%), Positives = 245/461 (53%), Gaps = 1/461 (0%)

Query: 15  YHQVERHVTRMIEDGRWRTGDRLPSLRQIATSMGVSIATVVHAYTELERKGVIEARPRSG 74
           Y  +   +   IE G +R G++LPS+R ++   GVSI+TV  AY  LE   +I  +PRSG
Sbjct: 4   YQHLATLLAERIEQGLYRHGEKLPSVRSLSQEHGVSISTVQQAYQTLETMKLITPQPRSG 63

Query: 75  HYVGAAISALPTPAAREQALAGPRVVNRSRLISTVLEAVGNHELVPFGVLCPDTSLLPLK 134
           ++V    +  P P    + +  P  + +  L+  +L A  +  +VP     PD     LK
Sbjct: 64  YFVAQRKAQPPVPPMT-RPVQRPVEITQWDLVLDMLVAHSDSSIVPLSKSTPDVETPSLK 122

Query: 135 ALVRIMGETMRSAPQVATGYETVQGNAELRRRIAWRMGECGMDVSAEGLVITTGAVEALY 194
            L R +   ++   Q   GY+ + G   LR ++A  M + G  V+A+ ++IT+G   ++ 
Sbjct: 123 PLWRELSRVVQHNLQTVLGYDLLAGQRVLREQVARLMLDSGSVVTADDIIITSGCHNSMS 182

Query: 195 IALRALTRPGDIVVIQSPTYYCFLQLLETLGLRAIEAPSSPEKGIDPEAVRHIVDRHRVA 254
           +AL A+ +PGDIV ++SP YY  +Q+L  +G++ IE P+ PE GI  EA+   +++  + 
Sbjct: 183 LALMAVCKPGDIVAVESPCYYGSMQMLRGMGVKVIEIPTDPETGISVEALELALEQWPIK 242

Query: 255 CCIFSPNFNNPDGSLTPDDAKREILDILAPRGIHVIEDDVAADLHYGPVRPSTFSQYDRH 314
             I  PN NNP G + PD  KR +L +     I + EDDV  +L     RP T   +D  
Sbjct: 243 GIILVPNCNNPLGFIMPDARKRAVLSLAQRHDIVIFEDDVYGELATEYPRPRTIHSWDID 302

Query: 315 GLVTLCSSFSKTVAPGFRVGWMAPGRIFDKAMEVKATTNVCCPTPTQMALARYLEQGLLQ 374
           G V LCSSFSK++APG RVGW+APGR  DK M +K   +      TQMA A ++ +G   
Sbjct: 303 GRVLLCSSFSKSIAPGLRVGWVAPGRYHDKLMHMKYAISSFNVPSTQMAAATFVLEGHYH 362

Query: 375 RHLRRLRTALVRQMEAMRQTIACSFPEGTSATRPLGGGVLWVRLPEGTDGTELFYRARDA 434
           RH+RR+R    R +      I   FP     TRP GG +LW+ LPE  D   +  +    
Sbjct: 363 RHIRRMRQIYQRNLALYTCWIREYFPCEICITRPKGGFLLWIELPEQVDMVCVTRQLCRM 422

Query: 435 GIAIAPGSIFSTQDSYTNYVRLGCNGVWDDRMAQGLRTLGE 475
            I +A GSIFS    Y N +R+ C     +   + L+ +GE
Sbjct: 423 KIQVAAGSIFSASGKYRNCLRINCALPLSETYREALKQIGE 463