Pairwise Alignments

Query, 542 a.a., nitrogenase molybdenum-iron protein alpha chain (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 485 a.a., nitrogenase molybdenum-iron protein alpha chain from Magnetospirillum magneticum AMB-1

 Score =  390 bits (1001), Expect = e-113
 Identities = 214/524 (40%), Positives = 308/524 (58%), Gaps = 60/524 (11%)

Query: 13  ESFVDEVTSLYPPKVAKKRRAHMVVRKDGDPGLAQ-QIEANTRTVPGIITQRGCCYAGCK 71
           ++ + EV   YP K AKKR  H+   K  + G     +++N ++VPG++T RGC YAG K
Sbjct: 13  QALIKEVLDQYPEKSAKKRARHLGTVKTEENGTPTCGVKSNIKSVPGVMTVRGCAYAGAK 72

Query: 72  GVVIGPYGDMVHIVHGPVGCSFYAWLTRRNQFRARGEAG-KNYLSYCFTTDMQDEDIIFG 130
           GVV GP  DMVHI HGP+GC  Y+W  RRN F   G  G  ++++   T+D Q+ DI+FG
Sbjct: 73  GVVWGPVKDMVHISHGPIGCGQYSWSQRRNYFT--GTVGIDSFVTMQVTSDFQERDIVFG 130

Query: 131 GEKKLAQAIREAAAIFR-PEAISVHATCPVGLIGDDIQAVARELSKETGIPVMAFNCEGY 189
           G+K L   I E   +F     ISV + CP+GLIGDDI+AVA++ +K+ G  V+   CEG+
Sbjct: 131 GDKNLEVMIDELDGLFPLNNGISVLSECPIGLIGDDIEAVAKKKAKDIGKKVVPVRCEGF 190

Query: 190 KGVSQSAGHHIANNKIFDMAL--GTREREA-GRFSVNVLGEYNIGGDAYEIERVLEKCGI 246
           +GVSQS GHHIAN+ I D     GT E  A G + VN++ +YNIGGDA+   ++LE+ G+
Sbjct: 191 RGVSQSLGHHIANDAIRDWVFEKGTEEEWATGPYDVNLIADYNIGGDAWPSRKLLEEIGL 250

Query: 247 EVVATFSGNSVYEDMCTAHSANLNLVMCHRSINYLAEMMETKFGIPWMKVNFIGMRSMSQ 306
            V+ ++SG++   ++  A  A LNL+ C+RS+NY+   ME K+G+PW++ NF G   ++ 
Sbjct: 251 RVIGSWSGDATLAEIERAPKAKLNLIHCYRSMNYICRHMEEKYGMPWIEYNFFGPTQIAA 310

Query: 307 SLRKIARYFDDAALTARIESVIAEEEARAETALAAYMPGLEGKTAMLFVGGSRAHHYMHL 366
           SLRKIA  FD+  +  + E VIA+ +   +   A + P L+GKT ML+VGG R  H    
Sbjct: 311 SLRKIAAAFDE-TIQKKAEEVIAKYQPLVDAVTARFKPRLDGKTVMLYVGGLRPRHTATA 369

Query: 367 MRDLGMEPLVAGFEFAHRDDYEGRRVIPTIRVDADSKNIEELKVTADPERYRPRLDPAYR 426
             DLGM+ + +G+EFAH DDY+              +    LK                 
Sbjct: 370 YEDLGMKIVGSGYEFAHNDDYQ--------------RTATYLK----------------- 398

Query: 427 EQLEREGLLSSYEGMWDDMGEGTLVIDDVSHVEIEKLIHRMNPDIICSGIKDKYVIEKFG 486
                EG L               + DDVS  E+EK I ++ PD++ SGIK+KY  +K G
Sbjct: 399 -----EGTL---------------IYDDVSEFELEKFIEQLRPDLVGSGIKEKYSTQKMG 438

Query: 487 VPCKQLHNYDYSGPYAGYEGAVNFARDVYAMIHSPAWKLTRSPF 530
           VP +Q+H++DYSGPY GY+G   FARD+   I++P W   ++P+
Sbjct: 439 VPFRQMHSWDYSGPYHGYDGFAIFARDMDMAINAPVWGKLKAPW 482