Pairwise Alignments

Query, 476 a.a., sigma-54 dependent transcriptional regulator/response regulator (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 442 a.a., C4-dicarboxylate transport transcriptional regulatory protein from Pseudomonas putida KT2440

 Score =  298 bits (762), Expect = 3e-85
 Identities = 186/472 (39%), Positives = 264/472 (55%), Gaps = 39/472 (8%)

Query: 4   LLIVEDNEDVRRQLRWGLAKEPYDLHLAGSVDEALALQREHAPAVVTLDLGLPPDAEGAS 63
           +LIVED+  V    +  LA E       GS ++AL    +    +V  D+ LP       
Sbjct: 8   VLIVEDDPHVLLGCQQALALEDIACEGVGSAEQALERIGDDFAGIVVSDIRLP-----GI 62

Query: 64  EGFRGLAALLDHDPRTKVIVVTGHHDMENALRAIEGGAYDFCQKPADLEMLKVIISRAFF 123
           +G   L  L   D    V+++TGH D++ A+ A+  GAYDF +KP   E L  ++ RA  
Sbjct: 63  DGLELLNRLKARDRSLPVVLITGHGDIDMAVGAMRNGAYDFMEKPFSPERLVDVVRRALE 122

Query: 124 LHGLQGGGAMASASGMASASGGASAPDAVSGAGAGGGKPDDGWQGIVGRCPSMRAVFETV 183
             GL     +A    +A  S       ++ G              I+GR P+M  + E +
Sbjct: 123 QRGLSRE-VVALRRQLAEQS-------SLEGR-------------IIGRSPAMEHLRELI 161

Query: 184 AKVAVTGAPVLVTGESGTGKELVARAIHALGPRCTRTFVAINCGAIPDNLLEAEFFGYEK 243
           A VA T A VL+ GE+GTGKELVAR +H    R +  FVA+NCG +P+NL E+E FG+E 
Sbjct: 162 ANVADTSANVLIEGETGTGKELVARCLHDFSRRQSHPFVALNCGGLPENLFESEIFGHEA 221

Query: 244 GAFTGATQRVQGKVEYADGGTLFLDEIGELPANLQVKLLRFLQEKVIQRVGGRKDIAVDA 303
            AFTGA +R  GK+E+A+GGTLFLDE+  +P NLQ+KLLR LQE+ ++R+G  + I VD 
Sbjct: 222 NAFTGAGKRRIGKIEHANGGTLFLDEVESMPINLQIKLLRVLQERTLERLGSNQSIPVDC 281

Query: 304 RIVAATNRDIQTEIASGRFREDLYYRIGVVPVALPPLRARGDDILLLARHFLESSAGEGT 363
           R++AAT  D+     SG+FR DLYYR+ VV + LPPLR R +DIL L  HFL+ SA    
Sbjct: 282 RVIAATKADLDALGQSGQFRSDLYYRLNVVTLELPPLRERREDILQLFEHFLQQSALRFD 341

Query: 364 GNIVGFSPAAEQAMLRYAWPGNVRELENKVRRAVIFASGRRIMPDDLGFDETPAKAAAPR 423
                        ++ + WPGNVREL N   R   +A G   +P    F + P+  A   
Sbjct: 342 RETPTLDSQTLSRLMAHDWPGNVRELRNVAER---YALG---LP---AFKKGPSGGA--- 389

Query: 424 PEGSL-REARNALERDMVLSALDKCGGNIVQASLAIGVSRPTFYDLLRKHGI 474
            +G L  EA  A ER+++  AL + GGN+ QAS  +G+++ T +D ++K+G+
Sbjct: 390 NQGLLFAEAVEAFERNLLTDALQRTGGNLSQASQELGMAKTTLFDKVKKYGL 441