Pairwise Alignments

Query, 476 a.a., sigma-54 dependent transcriptional regulator/response regulator (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 441 a.a., fused DNA-binding response regulator in two-component regulatory system with ZraS: response regulator/sigma54 interaction protein (NCBI) from Escherichia coli BW25113

 Score =  299 bits (766), Expect = 1e-85
 Identities = 176/464 (37%), Positives = 269/464 (57%), Gaps = 40/464 (8%)

Query: 4   LLIVEDNEDVRRQLRWGLAKEPYDLHLAGSVDEALALQREHAPAVVTLDLGLPPDAEGAS 63
           +L+V+D+      L+  L    Y++ LA S  +AL   RE    +V  D+ +        
Sbjct: 8   ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQVFDLVLCDVRM-----AEM 62

Query: 64  EGFRGLAALLDHDPRTKVIVVTGHHDMENALRAIEGGAYDFCQKPADLEMLKVIISRAF- 122
           +G   L  +   +P   V+++T +  +E A+ A++ GA D+  KP D + L+  + +A  
Sbjct: 63  DGIATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKALA 122

Query: 123 FLHGLQGGGAMASASGMASASGGASAPDAVSGAGAGGGKPDDGWQGIVGRCPSMRAVFET 182
             H +       +AS                              G+VG+ P+M+ +   
Sbjct: 123 HTHSIDAETPAVTASQF----------------------------GMVGKSPAMQHLLSE 154

Query: 183 VAKVAVTGAPVLVTGESGTGKELVARAIHALGPRCTRTFVAINCGAIPDNLLEAEFFGYE 242
           +A VA + A VL+ G+SGTGKELVARAIHA   R  +  V +NC A+ ++LLE+E FG+E
Sbjct: 155 IALVAPSEATVLIHGDSGTGKELVARAIHASSARSEKPLVTLNCAALNESLLESELFGHE 214

Query: 243 KGAFTGATQRVQGKVEYADGGTLFLDEIGELPANLQVKLLRFLQEKVIQRVGGRKDIAVD 302
           KGAFTGA +R +G+   ADGGTLFLDEIG++   +QV+LLR +QE+ +QRVG  + I+VD
Sbjct: 215 KGAFTGADKRREGRFVEADGGTLFLDEIGDISPMMQVRLLRAIQEREVQRVGSNQIISVD 274

Query: 303 ARIVAATNRDIQTEIASGRFREDLYYRIGVVPVALPPLRARGDDILLLARHFLESSAGEG 362
            R++AAT+RD+  E+ +GRFR+DLYYR+ VV + +P LR R +DI LLA HFL+  A   
Sbjct: 275 VRLIAATHRDLAAEVNAGRFRQDLYYRLNVVAIEVPSLRQRREDIPLLAGHFLQRFAERN 334

Query: 363 TGNIVGFSPAAEQAMLRYAWPGNVRELENKVRRAVIFASGRRIMPDDLGFDETPAKAAAP 422
              + GF+P A   ++ Y WPGN+RELEN V RAV+  +G  I   +L      A A+ P
Sbjct: 335 RKAVKGFTPQAMDLLIHYDWPGNIRELENAVERAVVLLTGEYISERELPL----AIASTP 390

Query: 423 RPEGSLREARN--ALERDMVLSALDKCGGNIVQASLAIGVSRPT 464
            P G  ++ +    +E++++L+AL+K GGN  +A+  +G++R T
Sbjct: 391 IPLGQSQDIQPLVEVEKEVILAALEKTGGNKTEAARQLGITRKT 434