Pairwise Alignments

Query, 476 a.a., sigma-54 dependent transcriptional regulator/response regulator (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 461 a.a., fused response regulator of ato operon, in two-component system with AtoS: response regulator/sigma54 interaction protein from Escherichia coli BL21

 Score =  325 bits (832), Expect = 3e-93
 Identities = 184/478 (38%), Positives = 274/478 (57%), Gaps = 33/478 (6%)

Query: 4   LLIVEDNEDVRRQLRWGLAKEPYDLHLAGSVDEALALQREHAPAVVTLDLGLPPDAEGAS 63
           +LIV+D ++VRR L    A + ++ H A +   AL L  +  P VV +D+ +P       
Sbjct: 7   ILIVDDEDNVRRMLSTAFALQGFETHCANNGRTALHLFADIHPDVVLMDIRMPE-----M 61

Query: 64  EGFRGLAALLDHDPRTKVIVVTGHHDMENALRAIEGGAYDFCQKPADLEMLKVIISRAFF 123
           +G + L  +  H+ RT VI++T + ++E A+ A+  GA+D+  KP DL+ L +I+ RA  
Sbjct: 62  DGIKALKEMRSHETRTPVILMTAYAEVETAVEALRCGAFDYVIKPFDLDELNLIVQRALQ 121

Query: 124 LHGLQGGGAMASASGMASASGGASAPDAVSGAGAGGGKPDDGWQGIVGRCPSMRAVFETV 183
           L  ++        +   S                        W  I+   P+M  + +  
Sbjct: 122 LQSMKKEIRHLHQALSTSWQ----------------------WGHILTNSPAMMDICKDT 159

Query: 184 AKVAVTGAPVLVTGESGTGKELVARAIHALGPRCTRTFVAINCGAIPDNLLEAEFFGYEK 243
           AK+A++ A VL++GESGTGKEL+ARAIH    R    F+ +NC A+P++LLE+E FG+EK
Sbjct: 160 AKIALSQASVLISGESGTGKELIARAIHYNSRRAKGPFIKVNCAALPESLLESELFGHEK 219

Query: 244 GAFTGATQRVQGKVEYADGGTLFLDEIGELPANLQVKLLRFLQEKVIQRVGGRKDIAVDA 303
           GAFTGA    QG  E A+ GTL LDEIGE+P  LQ KLLR LQE+  +R+GG + I VD 
Sbjct: 220 GAFTGAQTLRQGLFERANEGTLLLDEIGEMPLVLQAKLLRILQEREFERIGGHQTIKVDI 279

Query: 304 RIVAATNRDIQTEIASGRFREDLYYRIGVVPVALPPLRARGDDILLLARHFLESSAGEGT 363
           RI+AATNRD+Q  +  G FREDL+YR+ V+ + LPPLR R +DI LLA HFL+  + E  
Sbjct: 280 RIIAATNRDLQAMVKEGTFREDLFYRLNVIHLILPPLRDRREDISLLANHFLQKFSSENQ 339

Query: 364 GNIVGFSPAAEQAMLRYAWPGNVRELENKVRRAVIFASGRRIMPDDL------GFDETPA 417
            +I+   P A   +  ++WPGN+REL N + RAV+  SG  I  +DL             
Sbjct: 340 RDIIDIDPMAMSLLTAWSWPGNIRELSNVIERAVVMNSGPIIFSEDLPPQIRQPVCNAGE 399

Query: 418 KAAAPRPEGSLREARNALERDMVLSALDKCGGNIVQASLAIGVSRPTFYDLLRKHGIE 475
              AP  E +L+E    +E+ +++  L++  GN  + +L +G+SR      L+++GI+
Sbjct: 400 VKTAPVGERNLKEEIKRVEKRIIMEVLEQQEGNRTRTALMLGISRRALMYKLQEYGID 457