Pairwise Alignments

Query, 271 a.a., type III secretion lipoprotein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 260 a.a., type III secretion inner membrane ring lipoprotein SctJ from Dickeya dianthicola 67-19

 Score =  129 bits (324), Expect = 6e-35
 Identities = 87/238 (36%), Positives = 135/238 (56%), Gaps = 21/238 (8%)

Query: 19  LAALLLVLLTGC--KAELYKGLNEEQANTMLATLLKRGIEVDKQSEGKNGYTLSVERRQV 76
           L  LL +L+ GC  + EL++GL+E  AN ++A L    I  +K++E K G ++ ++ + +
Sbjct: 10  LTLLLALLIAGCGDRVELHRGLSENDANEVIAALGGYHIGAEKRTE-KTGVSILIDVKDM 68

Query: 77  VQALEVLRENSLPREQYQSLGKVFSGDGMIASPSEEKARLSYAISQELADTFSRIDGVLT 136
            +A+ +L    LPR+   +LG+VF   G+I++P EE+AR  YA+SQE+  T ++IDGVL 
Sbjct: 69  ERAVNILNAAGLPRQARTNLGQVFQKTGVISTPLEERARYIYALSQEVESTLTQIDGVLV 128

Query: 137 ARAHVVLASSDVGTDTRTPASAAVFLRHTEDSPVVNLIPKIREMTAKAVPGL---DYEKV 193
           AR HVVL       +   PASAAVF+++  +    ++ P+IR M A ++PGL     + +
Sbjct: 129 ARVHVVLPERIAPGEPIQPASAAVFIKYRPELEPDSIEPRIRRMVASSIPGLAGKSDKDL 188

Query: 194 SVMLVPVRESVTVPLRD-APTLLGIPLPSDSGPSYLLAGAAIAL--LCALLALALMGV 248
           +++ VP       P +D  PT+         GP  L       L  L  LLALAL GV
Sbjct: 189 AIVFVPAE-----PYKDHIPTV-------SLGPFQLTPQTMTQLQWLAGLLALALAGV 234