Pairwise Alignments

Query, 271 a.a., type III secretion lipoprotein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 260 a.a., type III secretion inner membrane ring lipoprotein SctJ from Dickeya dadantii 3937

 Score =  129 bits (324), Expect = 6e-35
 Identities = 87/238 (36%), Positives = 135/238 (56%), Gaps = 21/238 (8%)

Query: 19  LAALLLVLLTGC--KAELYKGLNEEQANTMLATLLKRGIEVDKQSEGKNGYTLSVERRQV 76
           L  LL +L+ GC  + EL++GL+E  AN ++A L    I  +K++E K G ++ ++ + +
Sbjct: 10  LTLLLAMLIVGCGDRVELHRGLSENDANEVIAALGGYHIGAEKRTE-KTGVSILIDVKDM 68

Query: 77  VQALEVLRENSLPREQYQSLGKVFSGDGMIASPSEEKARLSYAISQELADTFSRIDGVLT 136
            +A+ +L    LPR+   +LG+VF   G+I++P EE+AR  YA+SQE+  T ++IDGVL 
Sbjct: 69  ERAVNILNAAGLPRQARTNLGQVFQKTGVISTPLEERARYIYALSQEVESTLTQIDGVLV 128

Query: 137 ARAHVVLASSDVGTDTRTPASAAVFLRHTEDSPVVNLIPKIREMTAKAVPGL---DYEKV 193
           AR HVVL       +   PASAAVF+++  +    ++ P+IR M A ++PGL     + +
Sbjct: 129 ARVHVVLPERIAPGEPIQPASAAVFIKYRPELEPDSIEPRIRRMVASSIPGLAGKSDKDL 188

Query: 194 SVMLVPVRESVTVPLRD-APTLLGIPLPSDSGPSYLLAGAAIAL--LCALLALALMGV 248
           +++ VP       P +D  PT+         GP  L       L  L  LLALAL GV
Sbjct: 189 AIVFVPAE-----PYKDHIPTV-------SLGPFQLTPQTMTQLQWLAGLLALALAGV 234