Pairwise Alignments

Query, 271 a.a., type III secretion lipoprotein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 566 a.a., flagellar M-ring protein from Agrobacterium fabrum C58

 Score = 50.1 bits (118), Expect = 1e-10
 Identities = 54/184 (29%), Positives = 86/184 (46%), Gaps = 13/184 (7%)

Query: 17  VALAALLLVLLTGCKAELYKGLNEEQANTMLATLLKRGIEVDKQSEGKNGYTLSVERRQV 76
           + LAA L V     +  LY GL +   N +   L + G++      G +G +L V     
Sbjct: 41  IILAAALYVNRPAYET-LYVGLEKSDLNKISIALAESGLDFQV---GTDGSSLQVPVGLT 96

Query: 77  VQALEVLRENSLPREQYQSLGKVFSGDGMIASPS--EEKARLSYAISQELADTFSRIDGV 134
            +A  +L E  LP +   +  ++F   G +   S  +E  R+  A+  E+  +  +IDGV
Sbjct: 97  SKARLLLAERGLP-DSANAGYELFDNVGSLGLTSFMQEVTRVR-ALEGEIGRSIQQIDGV 154

Query: 135 LTARAHVVLASSDVGTDTR--TPASAAVFLRHTEDSPVVNLIPKIREMTAKAVPGLDYEK 192
             AR H+VL   DVG   R     +A+V +R    S        IR + A AVPGL+ + 
Sbjct: 155 SAARVHIVL--PDVGNFRRGEQKPTASVMIR-ASASAGRKASASIRHLVASAVPGLEVDD 211

Query: 193 VSVM 196
           V+++
Sbjct: 212 VTLL 215