Pairwise Alignments

Query, 216 a.a., type III secretion system protein, YscR family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 270 a.a., flagellar type III secretion system pore protein FliP from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  149 bits (377), Expect = 4e-41
 Identities = 84/207 (40%), Positives = 129/207 (62%), Gaps = 13/207 (6%)

Query: 13  MALLGLAPFFLMMVTSYVKIVVVTSLVRNALGVQQVPPTMVMNGLAIILSIFIMAPVASG 72
           M +L LAP  ++M TS+V+I+VV SL+R ALG+QQ PP  V+  L++ LS  +MAP    
Sbjct: 68  MTVLSLAPSIVIMTTSFVRIIVVLSLLRTALGLQQSPPNAVLVSLSLFLSAIVMAPTWQD 127

Query: 73  TLDLMQNMKIGPDPAPREIIAL---LDKASPPLRGFLERNADDKVVTVFMSTAKRIWPAD 129
             D       G  P   + I L    D+AS P++ F+    D   + +F   +K     D
Sbjct: 128 AYDS------GIRPLMDQQIELPQAFDQASEPVKTFMLAQVDRGDLALFTRLSK----ID 177

Query: 130 QHASISRDNLLILIPSFTISELTRAFQIGFLLYLPFVAIDLVISNILLAMGMMMVSPMTI 189
              ++    L ++ P+F ISEL +AF+IGFLL++PF+ IDLV++++L++MGMMM+ P+ +
Sbjct: 178 PPQNVQDLPLRVVTPAFMISELKKAFEIGFLLFVPFLVIDLVVASVLMSMGMMMLPPVVV 237

Query: 190 SLPFKLLLFVTLDGWLKVSQGLLLSYR 216
           SLPFKL+ FV +DGW  V+  L+ S++
Sbjct: 238 SLPFKLIFFVLVDGWRLVAGSLVESFQ 264