Pairwise Alignments

Query, 465 a.a., sigma-54 dependent DNA-binding response regulator (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 483 a.a., sigma-54 dependent transcriptional regulator from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  262 bits (670), Expect = 2e-74
 Identities = 173/475 (36%), Positives = 247/475 (52%), Gaps = 22/475 (4%)

Query: 4   ILVVDDESLVRILVADTAGGMGHEVLAAASLTEAEEKAAKG--IDVVFLDVLLPDGNGLE 61
           ILVVDD+   R L+       G+ V+ AAS  EA ++  +G   D++ LD+++P+ +GLE
Sbjct: 5   ILVVDDDPTQRRLIQAVLERDGNAVVHAASGGEAIDRMTRGGGADLILLDMVMPEMSGLE 64

Query: 62  NVARFTRLPGTPEVIVITGHGSADGAETALRHGVWDYVQKPLKVQEVMLSLSRALAYR-- 119
            +A          VIV+T +G  D    A++ G  D+  KP+  + +++ +  A+  +  
Sbjct: 65  CLAELRSAGINEPVIVLTANGGIDMVVKAMQAGAQDFFVKPVGPERLLVGVRNAMQMKRL 124

Query: 120 ---AGRNSATGRRPLRRDAIVGDSPALREALDLVEEAAASTVNVLITGETGTGKELFARA 176
               GR +   +     D IVGDSP +R    L   AA S++ VLITGE+G GKE+ ARA
Sbjct: 125 TAEVGRLTKRVQGRTSFDDIVGDSPPMRMVKALGARAAKSSIPVLITGESGVGKEVIARA 184

Query: 177 VHANSARCESPLVTLDCASLTENLVESQLFGHVRGAFTGAERNSEGLLRQAHGGTLFLDE 236
           +H  S R   P V ++C +L  NL+ES LFGH +GAFTGA   + G  R+A GGTLFLDE
Sbjct: 185 LHGASDRAGKPFVAVNCGALPANLIESILFGHEKGAFTGAVDKTLGKFREADGGTLFLDE 244

Query: 237 AGDLPLAMQGSFLRALELRRFRPVGSAHEVSSDFRLVAATNKNLHEMTRLDLFRSDLLYR 296
            G+LPL MQ   LRAL+     PVG    V  D R+V+ATN++  +  +   FR DL YR
Sbjct: 245 IGELPLDMQVKLLRALQEGEIDPVGGKRPVKIDVRIVSATNRDPAQQVKDGAFREDLFYR 304

Query: 297 LRGLTITLPPLRDRTADILPLCEHVIEGYCAQHGAPMKQMAGDFMETVERYAWPGNIREL 356
           L    I  P LRDR  DI PL +H I  + A+ G  +   A + +  ++ + WPGN+R+L
Sbjct: 305 LNVFPIEAPSLRDRREDIAPLVDHFIARFNAEEGKRIAGCAPETLALLQGFDWPGNVRQL 364

Query: 357 RHAVERACTAAHDDSTLYARQLPVEVRVTVARATIPCASEVDHCMPAAEGHDGTPMTLRD 416
            +AV RA   A D   L     P    ++   A +P A  +     A    D      + 
Sbjct: 365 ENAVFRAIVLA-DAPFLQPHDFPA---ISGVAAPMPDAQPLQVATAAGAQTDAAAQVDQP 420

Query: 417 YKACAERAYVTRLLD------RHGADVRAA-----ASEAGISRGHLYELVRKHGL 460
            +   ER ++  L D      +H  +V A      A   GI R  LY  VR+ GL
Sbjct: 421 IRILDERGHLRTLEDIERDLIQHAIEVYAGHMSEIARRLGIGRSTLYRKVREQGL 475