Pairwise Alignments

Query, 479 a.a., sigma-54 dependent transcriptional regulator (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 456 a.a., DNA-binding response regulator from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  259 bits (661), Expect = 2e-73
 Identities = 146/390 (37%), Positives = 230/390 (58%), Gaps = 11/390 (2%)

Query: 80  VDLIVLARADAIRQAVDAVRAGAGNYLTYPLHPEEVRLVTQK-LHESALVRSELDYLRDR 138
           V +I++     IR AV A++ GA  Y+T P++P+E  LV +  L+  A    E       
Sbjct: 74  VPVILMTTYADIRTAVRAIKMGAFEYITKPINPDETLLVIKNALNRKAEAEQEA------ 127

Query: 139 LIQGRSGGDEGIVLDTRSPRMREVYDKIRLVAATRSTVLLTGETGTGKSLIARLIHSHSN 198
            +   S G    V   +SP+  ++ + I LVA T  +V++ GE+GTGK  +AR+IH  S 
Sbjct: 128 -VSTASAGSFQFVRG-QSPQAEQIEEFISLVAPTNLSVIIEGESGTGKEYVARMIHEQSK 185

Query: 199 RHGKRFISVHCGAIPEALVESELFGHEKGAFTGAIRKKPGRFEIAEGGTIFLDEIGTIGP 258
           RH + F+++ CGA+ + L  SELFG+ KGAFTGA++ K G+FE AEGGT+FLDEIG +  
Sbjct: 186 RHDRPFVAIDCGALSKELAGSELFGYVKGAFTGALQDKRGQFEAAEGGTLFLDEIGNLPY 245

Query: 259 SVQIKLLNVLQDRCFQRVGGETVIRPDVRVVAATNEDLSTLCAQGRFRRDLYYRLNVFPI 318
            VQ+KLL  LQ+R  +++G  T    DVRV+AATNEDL    A G+FR DLY+RLN F I
Sbjct: 246 EVQVKLLRALQERKVRKLGSTTDQNVDVRVLAATNEDLVQAVANGQFREDLYHRLNEFKI 305

Query: 319 DIPPLRERKEDILQLAEAFVRRCNPQRSRDIRAIHPDVIDAFMRYDWPGNVRELENIIER 378
           ++PPLR+R  D++  A  F+++ N +  + ++       DA +RY+WPGN+REL+N+++R
Sbjct: 306 NLPPLRDRDGDVVLFANHFLQQANRELEKAVQGFDAATEDAMLRYNWPGNLRELKNVVKR 365

Query: 379 ACILEGGEVLSPEAFPAEFRGLPHAVRNRALDISL--PLEAARRHALDSFEREYLERALA 436
           A +L   E ++ +  PAE      A +  ++  S   P+E   +   +  ERE +   L 
Sbjct: 366 AVLLAKSEFVTLQELPAEIVHYTPAPQQASVAYSPHDPMETDLKSINERTEREMILAMLE 425

Query: 437 TSGGSIKGAAAIAGVTTRQIHKLMTRHSLK 466
               +   AA +  +  + ++  +  ++++
Sbjct: 426 RVKYNKSKAARLLNIDRKTLYNKLKLYNIE 455