Pairwise Alignments

Query, 479 a.a., sigma-54 dependent transcriptional regulator (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 461 a.a., fused response regulator of ato operon, in two-component system with AtoS: response regulator/sigma54 interaction protein from Escherichia coli BL21

 Score =  264 bits (674), Expect = 5e-75
 Identities = 146/403 (36%), Positives = 228/403 (56%), Gaps = 8/403 (1%)

Query: 68  QAVHGFRQQHPSVDLIVLARADAIRQAVDAVRAGAGNYLTYPLHPEEVRLVTQKLHESAL 127
           +A+   R       +I++     +  AV+A+R GA +Y+  P   +E+ L+ Q+  +   
Sbjct: 65  KALKEMRSHETRTPVILMTAYAEVETAVEALRCGAFDYVIKPFDLDELNLIVQRALQLQS 124

Query: 128 VRSELDYLRDRLIQGRSGGDEGIVLDTRSPRMREVYDKIRLVAATRSTVLLTGETGTGKS 187
           ++ E+ +L   L      G     + T SP M ++      +A ++++VL++GE+GTGK 
Sbjct: 125 MKKEIRHLHQALSTSWQWGH----ILTNSPAMMDICKDTAKIALSQASVLISGESGTGKE 180

Query: 188 LIARLIHSHSNRHGKRFISVHCGAIPEALVESELFGHEKGAFTGAIRKKPGRFEIAEGGT 247
           LIAR IH +S R    FI V+C A+PE+L+ESELFGHEKGAFTGA   + G FE A  GT
Sbjct: 181 LIARAIHYNSRRAKGPFIKVNCAALPESLLESELFGHEKGAFTGAQTLRQGLFERANEGT 240

Query: 248 IFLDEIGTIGPSVQIKLLNVLQDRCFQRVGGETVIRPDVRVVAATNEDLSTLCAQGRFRR 307
           + LDEIG +   +Q KLL +LQ+R F+R+GG   I+ D+R++AATN DL  +  +G FR 
Sbjct: 241 LLLDEIGEMPLVLQAKLLRILQEREFERIGGHQTIKVDIRIIAATNRDLQAMVKEGTFRE 300

Query: 308 DLYYRLNVFPIDIPPLRERKEDILQLAEAFVRRCNPQRSRDIRAIHPDVIDAFMRYDWPG 367
           DL+YRLNV  + +PPLR+R+EDI  LA  F+++ + +  RDI  I P  +     + WPG
Sbjct: 301 DLFYRLNVIHLILPPLRDRREDISLLANHFLQKFSSENQRDIIDIDPMAMSLLTAWSWPG 360

Query: 368 NVRELENIIERACILEGGEVLSPEAFPAEFRGLPHAVRNRALDISLPL-EAARRHALDSF 426
           N+REL N+IERA ++  G ++  E  P + R     V N     + P+ E   +  +   
Sbjct: 361 NIRELSNVIERAVVMNSGPIIFSEDLPPQIR---QPVCNAGEVKTAPVGERNLKEEIKRV 417

Query: 427 EREYLERALATSGGSIKGAAAIAGVTTRQIHKLMTRHSLKKED 469
           E+  +   L    G+    A + G++ R +   +  + +   D
Sbjct: 418 EKRIIMEVLEQQEGNRTRTALMLGISRRALMYKLQEYGIDPAD 460