Pairwise Alignments

Query, 652 a.a., methyl-accepting chemotaxis protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 720 a.a., methyl-accepting chemotaxis protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  342 bits (877), Expect = 3e-98
 Identities = 272/731 (37%), Positives = 378/731 (51%), Gaps = 96/731 (13%)

Query: 2   TLARKLIVGFGAVLLLLVIMGGVSFNALSEAVDGFSDYRRMARGSNLAGDIVEHVLLMRV 61
           +LA +L++ F A+LLL  ++  + +    + +      R       + GD+V      R+
Sbjct: 6   SLATRLLMAFTALLLLGAVVATMGWRTQHKLIGEMETAR-------VVGDMVTTSERARI 58

Query: 62  NAVSFHANGEETAAKGFDKSRQDLDATLTKAAETIKNPERARHVKEARDAFTQYAQAFEA 121
           + + +  NG E +A   D   + + A++ +   T+   E    ++      ++Y   F  
Sbjct: 59  DVLYYLLNGHEESAGEVDAKVKRILASVERIRGTLGGQEGG-DLQAIAQKSSEYQLLFRE 117

Query: 122 MHKVQVEGERQNGIMFDLGPKMQQVVQRMREAAARDVDPSLREKVSDIARLLTETRLMTA 181
           +  V VE ++          ++      + EA+       + ++V ++ +L   +R+   
Sbjct: 118 LQSVGVERDKTLQQAIAAASQVTDAFDALFEASMAASATDVADRVQEMQKLFLLSRVHIL 177

Query: 182 RFM-------VVRTPETYAAGKAGVPGIESVLGQLQAAGGPGLREGAHELAQLFRQYMGA 234
            ++       ++R  E     + GV  ++     L+A  G  L      + Q +   +GA
Sbjct: 178 YYLWRGKPDDLMRVREYLDKVRKGVEPLQQ--SALRARFGTALDSAVSSVRQ-YEAMVGA 234

Query: 235 YEVMGPA--------MLKAGDLFDGA--LATHGPA--------IAASALAVRESYL---- 272
           +    P         +  A  L D A  L     A         AA+ LA+  + L    
Sbjct: 235 FTEFEPRRRALMEKMVASATVLADSARILLERQDAHTQESVRFSAATVLAISLTALLFGI 294

Query: 273 --------QEQNALGPKVQAANDMARMVVGVLVVVALLVGIGT----------------- 307
                     +  LG  V AA  +A   V V++ V     IGT                 
Sbjct: 295 VFTVLTTRMIKKGLGRAVAAAESVAEGNVDVVLEVDSRDEIGTLLTSMNRMLEAERKVAT 354

Query: 308 -AWFLIRS-----------------VLAQLGADPAELAGVARRIADGDLTVPFAGEQQRG 349
            A  L R                   LA++ A    +A +A  +A GDLT   A   +  
Sbjct: 355 AATELARGQAVTQPEPRGPRDTLTRALAEMVAVERNIAELAVTMASGDLTRRIAPRSEED 414

Query: 350 -VYADMKLMAGNLASVIGEVRGGAENVAAGSEQLSASAESLSQGATEQAASIEEISASME 408
            +   +  M   ++ V+ +V+ GAENVAAGSE+LSA+AE+LSQGATEQAAS+E+ SASME
Sbjct: 415 KLLRSLMDMVERISCVVRDVQLGAENVAAGSEELSATAEALSQGATEQAASVEQCSASME 474

Query: 409 EMTANIRQNMENARQTETIAVQAAVDAESGGKAVTETVVAMRDIADKISIIEEIARQTNL 468
           EM   I QN ENA+ TETIA++AA DA   G AV ET+VAMRDIA +ISIIEEIARQT+L
Sbjct: 475 EMATRIAQNAENAKTTETIALRAAEDARQSGLAVEETLVAMRDIASRISIIEEIARQTDL 534

Query: 469 LALNAAIEAARAGEHGKGFAVVAAEVRKLAERSGAAAAEISDLSASSTAVAERAGEMLTK 528
           LALNAAIEAARAGE G+GFAVVAAEVRKLAERS AAAAEI+ LSA+S  V+ERAG +L K
Sbjct: 535 LALNAAIEAARAGEQGRGFAVVAAEVRKLAERSQAAAAEINRLSAASLDVSERAGSLLHK 594

Query: 529 MVPGIRRTAELVQEIAAASNEQNAGAEQVNKAIAQLDQVIQQNASASEEMASTSEELSSQ 588
           +VP I RTAELVQEIAAAS EQ  GAEQVN A+  LDQVIQQNA+ASEE+ASTSEELS+Q
Sbjct: 595 LVPDIARTAELVQEIAAASIEQREGAEQVNDALHMLDQVIQQNAAASEEVASTSEELSAQ 654

Query: 589 AEQLQVSVGRFKVSDTDAPARRRP-------APARSGAVAHQPARPASGRKGAGAVSLDL 641
           A  LQ +V  F++       R  P        P ++      P  PA+ R     + LDL
Sbjct: 655 AGHLQRTVAFFRIPGGGTRPRSAPFIAGQEKKPGQTRVEVDVPKAPATPR-----LRLDL 709

Query: 642 DGDDDSDFERY 652
             D+D DFER+
Sbjct: 710 SDDEDGDFERF 720