Pairwise Alignments

Query, 262 a.a., high-affinity branched-chain amino acid ABC transporter, ATP binding protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 255 a.a., leucine/isoleucine/valine transporter ATP-binding subunit from Pseudomonas simiae WCS417

 Score =  233 bits (593), Expect = 4e-66
 Identities = 120/255 (47%), Positives = 168/255 (65%), Gaps = 5/255 (1%)

Query: 4   VLDVRSISKNFGGLRALNEVDLRVDAGEIVALIGPNGAGKTTFFNCITGIYVPTEGEVVV 63
           +L V ++S  FGGL A+N V L V   ++VALIGPNGAGKTT FNC+TG Y P+ G +++
Sbjct: 5   ILKVENLSMRFGGLLAVNGVALTVKEKQVVALIGPNGAGKTTVFNCLTGFYKPSGGSILL 64

Query: 64  TRPGSEPVRVNGQKPNQVTELGMARTFQNIRLFQNMTVLENVMIGCHCRTRSGILGALLR 123
                +P++  G   +++   G+ RTFQN+RLF++MT +EN++I  H    +     L +
Sbjct: 65  D---GQPIQ--GLAGHEIARKGVVRTFQNVRLFKDMTAVENLLIAQHRHLNTNFFAGLFK 119

Query: 124 DAKTRGEEQEIIDKSYELLKSVHLQQHYKEQARNLPYGAQRRLEIARALATNPFLLLLDE 183
               R  E+E ++ +   L  V+L +     A  L YG QRRLEIAR + T P +L+LDE
Sbjct: 120 TPAFRKSEREAMEYAEYWLDKVNLTEFANRPAGTLAYGQQRRLEIARCMMTRPRILMLDE 179

Query: 184 PAAGMNPQETLELKGLVLEIRERLNLSVLLIEHDMNMVMSLSDRIYVMEYGSKIAEGTPE 243
           PAAG+NP+ET +LK L+  +RE  N +VLLIEHDM +VMS+SD I V+  G+ +A GTPE
Sbjct: 180 PAAGLNPKETEDLKALISVLREENNATVLLIEHDMKLVMSISDHIVVINQGTPLANGTPE 239

Query: 244 EVSRNPRVIKAYLGE 258
           ++  NP VIKAYLGE
Sbjct: 240 QIRDNPEVIKAYLGE 254