Pairwise Alignments

Query, 262 a.a., high-affinity branched-chain amino acid ABC transporter, ATP binding protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 255 a.a., branched chain amino acid transporter - ATP binding subunit from Pseudomonas putida KT2440

 Score =  236 bits (602), Expect = 4e-67
 Identities = 121/255 (47%), Positives = 169/255 (66%), Gaps = 5/255 (1%)

Query: 4   VLDVRSISKNFGGLRALNEVDLRVDAGEIVALIGPNGAGKTTFFNCITGIYVPTEGEVVV 63
           +L V  +S  FGGL A+N V L V   ++VALIGPNGAGKTT FNC+TG Y P+ G +++
Sbjct: 5   ILQVSGLSMRFGGLLAVNGVALTVKEKQVVALIGPNGAGKTTVFNCLTGFYKPSGGTILL 64

Query: 64  TRPGSEPVRVNGQKPNQVTELGMARTFQNIRLFQNMTVLENVMIGCHCRTRSGILGALLR 123
                +P++  G   +Q+   G+ RTFQN+RLF+ MT LEN++I  H    +     L +
Sbjct: 65  D---GQPIQ--GLAGHQIARKGVVRTFQNVRLFKEMTALENLLIAQHRHLNTNFFAGLFK 119

Query: 124 DAKTRGEEQEIIDKSYELLKSVHLQQHYKEQARNLPYGAQRRLEIARALATNPFLLLLDE 183
               R  E+E ++++   L+ V+L +     A  L YG QRRLEIAR + T P +++LDE
Sbjct: 120 TPSFRRSEKEAMERAQYWLEKVNLTEFANRTAGTLAYGQQRRLEIARCMMTQPRIIMLDE 179

Query: 184 PAAGMNPQETLELKGLVLEIRERLNLSVLLIEHDMNMVMSLSDRIYVMEYGSKIAEGTPE 243
           PAAG+NP+ET +LK L+  +RE  N++VLLIEHDM +VMS+SD I V+  G+ +A GTPE
Sbjct: 180 PAAGLNPKETEDLKALIAYLRESHNVTVLLIEHDMKLVMSISDHIVVINQGTPLAHGTPE 239

Query: 244 EVSRNPRVIKAYLGE 258
           ++  NP VIKAYLGE
Sbjct: 240 QIRDNPDVIKAYLGE 254