Pairwise Alignments

Query, 407 a.a., proline/arginine ABC transporter, permease component (from data) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 425 a.a., branched-chain amino acid ABC transporter permease from Pseudomonas simiae WCS417

 Score =  320 bits (821), Expect = 4e-92
 Identities = 176/361 (48%), Positives = 237/361 (65%), Gaps = 25/361 (6%)

Query: 45  LGTFALSFLWRYMLARKEAGGASARQGNAAAGGLMARVRSDARLRTPALLAVLVVFAVL- 103
           +G FA+S      L  +   G    QG  + G  +  +  D + R   ++  L+V A++ 
Sbjct: 56  VGRFAMS------LFLQTPKGVKILQGFESTGSGVHVLAPDYKSRLRWIIPALIVIAIVF 109

Query: 104 PMLVSTYQTNIMISALLYVMLGLGLNIVVGLSGQLVLGYVAFYAVGAYAYALLNADFGLG 163
           P+  + Y   ++I  L+YV+LGLGLNIVVGL+G L LGYVAFYA+GAY  AL     GLG
Sbjct: 110 PIFANKYLLTVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAYGLALGYQYLGLG 169

Query: 164 FWTVLPIGGALAAVFGILLGFPVLRLKGDYLAIVTLGFGEIVRLVLENWGSVTRGPSGI- 222
           FWTVLP+    AA+ G +LGFPVLR+ GDYLAIVTLGFGEI+RLVL NW S T GP+G+ 
Sbjct: 170 FWTVLPLAAIAAALAGCILGFPVLRMHGDYLAIVTLGFGEIIRLVLNNWLSFTGGPNGMP 229

Query: 223 -----------SKIARPG------LFGMELSVSEATTYIYYLILAAVIFTIFAVGRLKDS 265
                       K A+ G       FG++ + +    +IY ++   V+  ++   RL   
Sbjct: 230 VPSPTFLGLEFGKRAKDGGIPFHEFFGIDYNPNIKFLFIYIVLFLVVLAVLYIKHRLTRM 289

Query: 266 RIGRAWQALREDEIACEAMGIDLTTTKLTAFALGACWAGFAGVIFAAKTTFINPASFTFL 325
            +GRAW+ALREDEIAC +MG++    KL+AF +GA  AG AGV FA+   F+NP+SFTF 
Sbjct: 290 PVGRAWEALREDEIACRSMGLNHVLVKLSAFTIGASTAGLAGVFFASYQGFVNPSSFTFF 349

Query: 326 ESAMILAMVVLGGMGSTLGVVLGALVLILLPEYLRAFSEYRMLIFGAAMVLMMVFRPQGL 385
           ESA+ILA+VVLGGMGST+GVV+ A VL + PE LR+FSEYR+L+FG  MV+MM++RP+GL
Sbjct: 350 ESALILAIVVLGGMGSTVGVVIAAFVLTVAPELLRSFSEYRVLLFGVLMVVMMIWRPRGL 409

Query: 386 V 386
           +
Sbjct: 410 I 410